RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 CA3P07451 260 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 AKR1A1P14550 325 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ATP2A2P16615 1042 aaKnown RBP8.65□□□□□ -1.02
FAM228B-209ENST00000615135 VCAM1P19320 739 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ERCC3P19447 782 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 CYP2C18P33260 490 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PHKA1P46020 1223 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 USP14P54578 494 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PTPN5P54829 565 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 MECOMQ03112 1051 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 KRT32Q14532 448 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 KCNA10Q16322 511 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ATP2B3Q16720 1220 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 BLOC1S2Q6QNY1 142 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ATG9AQ7Z3C6 839 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PRSS33Q8NF86 280 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ANKS1AQ92625 1134 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 GLT1D1Q96MS3 346 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PRRX2Q99811 253 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 SPATC1LQ9H0A9 340 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
FAM228B-209ENST00000615135 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
FAM228B-209ENST00000615135 DIS3Q9Y2L1 958 aaKnown RBP8.65□□□□□ -1.02
FAM228B-209ENST00000615135 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.65□□□□□ -1.02
FAM228B-209ENST00000615135 SYNRGQ9UMZ2 1314 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 GOLGA6L3A6NEY3 463 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 BAG4O95429 457 aaKnown RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 LDHCP07864 332 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 TAL1P17542 331 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 AK2P54819 239 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 PTH1RQ03431 593 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 TAP1Q03518 808 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 GRB10Q13322 594 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 FOXD4L5Q5VV16 416 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 BMP8AQ7Z5Y6 402 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 RPUSD2Q8IZ73 545 aaKnown RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 KBTBD3Q8NAB2 608 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 FOXD4L4Q8WXT5 416 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 IL17RAQ96F46 866 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 INTS4Q96HW7 963 aaKnown RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 UBE2ZQ9H832 354 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 SH2B1Q9NRF2 756 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 HOXC10Q9NYD6 342 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
FAM228B-209ENST00000615135 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
FAM228B-209ENST00000615135 SLC27A2O14975 620 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 TLR3O15455 904 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 GFRA3O60609 400 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 GDF11O95390 407 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 IL9P15248 144 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 NCLP19338 710 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 NKX3-2P78367 333 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 GSTO1P78417 241 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 FGD1P98174 961 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 TCF15Q12870 199 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 COG2Q14746 738 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 ANKRD1Q15327 319 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 CCDC102BQ68D86 513 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 MB21D1Q8N884 522 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 PCSK9Q8NBP7 692 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 PHOSPHO2Q8TCD6 241 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 NSUN4Q96CB9 384 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 ZSCAN31Q96LW9 406 aaPredicted RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 ABCF2Q9UG63 623 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 LIMCH1Q9UPQ0 1083 aa8.63□□□□□ -1.03
FAM228B-209ENST00000615135 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
FAM228B-209ENST00000615135 UMODL1Q5DID0 1318 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 FOCADQ5VW36 1801 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
FAM228B-209ENST00000615135 RGS20O76081 388 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 GH2P01242 217 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 ASGR1P07306 291 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 PFKMP08237 780 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 FCER1AP12319 257 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 CUL4AQ13619 759 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 PKN1Q16512 942 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 ZNF792Q3KQV3 632 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 MCMDC2Q4G0Z9 681 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 VPS53Q5VIR6 699 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
FAM228B-209ENST00000615135 TATDN1Q6P1N9 297 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 RUFY3Q7L099 469 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 ZNF589Q86UQ0 364 aaPredicted RBP8.62□□□□□ -1.03
FAM228B-209ENST00000615135 CCDC83Q8IWF9 413 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
FAM228B-209ENST00000615135 TEX11Q8IYF3 940 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms