RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
TUBD1-216ENST00000613721 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-216ENST00000613721 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
TUBD1-216ENST00000613721 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
TUBD1-216ENST00000613721 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
TUBD1-216ENST00000613721 SERPINB13Q9UIV8 391 aa13.37□□□□□ -0.27
TUBD1-216ENST00000613721 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 GREB1LQ9C091 1923 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 B4DLN1 442 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 NDUFA10O95299 355 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 FCER1AP12319 257 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 APOBEC3HQ6NTF7 200 aaKnown RBP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 CEP112Q8N8E3 955 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 CDK5RAP3Q96JB5 506 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 CHP1Q99653 195 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 CAPN11Q9UMQ6 739 aa13.36□□□□□ -0.27
TUBD1-216ENST00000613721 EPN1Q9Y6I3 576 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-216ENST00000613721 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 SLC37A4O43826 429 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 TDP2O95551 362 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 ARHGAP25P42331 645 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBD1-216ENST00000613721 CHMP4BP1P59074 171 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 GRB10Q13322 594 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 COBLL1Q53SF7 1204 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 ANKRD40Q6AI12 368 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-216ENST00000613721 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 CRKP46108 304 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 KIAA0895Q8NCT3 520 aa13.35□□□□□ -0.27
TUBD1-216ENST00000613721 LARP4BQ92615 738 aaKnown RBP13.35□□□□□ -0.27
TUBD1-216ENST00000613721 MYH7BA7E2Y1 1941 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 ATP8B1O43520 1251 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 ABL1P00519 1130 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 DPEP1P16444 411 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 MTIF2P46199 727 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 DACT2Q5SW24 774 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 RETREG2Q8NC44 543 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 EEF2KMTQ96G04 330 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 NUP58Q9BVL2 599 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 BLOC1S4Q9NUP1 217 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 SHMT1P34896 483 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 TNNI2P48788 182 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 MCM6Q14566 821 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 PNMA5Q96PV4 448 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
TUBD1-216ENST00000613721 PUF60Q9UHX1 559 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 REXO2Q9Y3B8 237 aaKnown RBP13.34□□□□□ -0.27
TUBD1-216ENST00000613721 COL4A5P29400 1685 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
TUBD1-216ENST00000613721 POTEMA6NI47 508 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 PPIP5K2O43314 1243 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 BAG6P46379 1132 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 PDIA5Q14554 519 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 WDR59Q6PJI9 974 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 HPS3Q969F9 1004 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 TEKT1Q969V4 418 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
TUBD1-216ENST00000613721 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
TUBD1-216ENST00000613721 PVALEFA0A1B0GWK0 134 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 MYMKA6NI61 221 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 EDIL3O43854 480 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 MEA1Q16626 185 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 UBE2SQ16763 222 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 MIIPQ5JXC2 388 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 PPP4R3AQ6IN85 833 aa13.32□□□□□ -0.28
TUBD1-216ENST00000613721 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms