RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PXMP2Q9NR77 195 aa30.04■■■□□ 2.4
VEGFA-226ENST00000611736 MAP3K20Q9NYL2 800 aaKnown RBP30.04■■■□□ 2.4
VEGFA-226ENST00000611736 MYADML2A6NDP7 307 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 ADD1P35611 737 aaKnown RBP30.03■■■□□ 2.4
VEGFA-226ENST00000611736 IRX5P78411 483 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-226ENST00000611736 FUT2Q10981 343 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 TOB2Q14106 344 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-226ENST00000611736 TMEM63BQ5T3F8 832 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 HEATR3Q7Z4Q2 680 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 FCHSD1Q86WN1 690 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 SAMD3Q8N6K7 520 aa30.03■■■□□ 2.4
VEGFA-226ENST00000611736 ATN1P54259 1190 aaPredicted RBP30.02■■■□□ 2.4
VEGFA-226ENST00000611736 LRRC26Q2I0M4 334 aa30.02■■■□□ 2.4
VEGFA-226ENST00000611736 GPKOWQ92917 476 aaPredicted RBP eCLIP30.02■■■□□ 2.49e-7■□□□□ 11
VEGFA-226ENST00000611736 IWS1Q96ST2 819 aa30.02■■■□□ 2.4
VEGFA-226ENST00000611736 LARP6Q9BRS8 491 aaKnown RBP30.02■■■□□ 2.4
VEGFA-226ENST00000611736 WDR11Q9BZH6 1224 aa30.02■■■□□ 2.4
VEGFA-226ENST00000611736 UPF3AQ9H1J1 476 aaKnown RBP30.02■■■□□ 2.4
VEGFA-226ENST00000611736 PDRG1Q9NUG6 133 aa30.02■■■□□ 2.4
VEGFA-226ENST00000611736 GNEQ9Y223 722 aaKnown RBP30.02■■■□□ 2.4
VEGFA-226ENST00000611736 CCDC196A0A1B0GTZ2 297 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 GJA9P57773 515 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 ANAPC15P60006 121 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 PPP2R5BQ15173 497 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 TLK2Q86UE8 772 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 KLHDC9Q8NEP7 349 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 PHF24Q9UPV7 400 aa30.01■■■□□ 2.39
VEGFA-226ENST00000611736 V9GY48 417 aaPredicted RBP30.01■■■□□ 2.39
VEGFA-226ENST00000611736 H0YGN5 161 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 DYNC1LI2O43237 492 aaPredicted RBP30■■■□□ 2.39
VEGFA-226ENST00000611736 STXBP2Q15833 593 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 C8orf34Q49A92 452 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 C7orf61Q8IZ16 206 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 NR2E3Q9Y5X4 410 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 NID2Q14112 1375 aa30■■■□□ 2.39
VEGFA-226ENST00000611736 RBM47A0AV96 593 aaKnown RBP29.99■■■□□ 2.39
VEGFA-226ENST00000611736 NR3C2P08235 984 aa29.99■■■□□ 2.39
VEGFA-226ENST00000611736 PDIA3P30101 505 aaKnown RBP29.99■■■□□ 2.39
VEGFA-226ENST00000611736 KCNA10Q16322 511 aa29.99■■■□□ 2.39
VEGFA-226ENST00000611736 CUL5Q93034 780 aa29.99■■■□□ 2.39
VEGFA-226ENST00000611736 AP5M1Q9H0R1 490 aa29.99■■■□□ 2.39
VEGFA-226ENST00000611736 MYCLP12524 364 aaPredicted RBP29.98■■■□□ 2.39
VEGFA-226ENST00000611736 EVCP57679 992 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 CCT2P78371 535 aaKnown RBP29.98■■■□□ 2.39
VEGFA-226ENST00000611736 BEX3Q00994 111 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 DUSP28Q4G0W2 176 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 GNASQ5JWF2 1037 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 WWC2Q6AWC2 1192 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 USP17L6PQ6QN14 398 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 SEPT14Q6ZU15 432 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 SMARCC2Q8TAQ2 1214 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 SCFD2Q8WU76 684 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 PDCD2LQ9BRP1 358 aa29.98■■■□□ 2.39
VEGFA-226ENST00000611736 TSEN34Q9BSV6 310 aaKnown RBP29.98■■■□□ 2.39
VEGFA-226ENST00000611736 A0A1W2PQ45 241 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-226ENST00000611736 A0A1W2PQY0 241 aa29.97■■■□□ 2.39
VEGFA-226ENST00000611736 CTAGE5O15320 804 aa29.97■■■□□ 2.39
VEGFA-226ENST00000611736 CST5P28325 142 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-226ENST00000611736 ACLYP53396 1101 aa29.97■■■□□ 2.39
VEGFA-226ENST00000611736 CCSAPQ6IQ19 270 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-226ENST00000611736 IL31RAQ8NI17 732 aa29.97■■■□□ 2.39
VEGFA-226ENST00000611736 PSTPIP2Q9H939 334 aa29.97■■■□□ 2.39
VEGFA-226ENST00000611736 NCOA5Q9HCD5 579 aaKnown RBP29.97■■■□□ 2.39
VEGFA-226ENST00000611736 KIAA1217Q5T5P2 1943 aa29.96■■■□□ 2.39
VEGFA-226ENST00000611736 PGM5Q15124 567 aa29.96■■■□□ 2.39
VEGFA-226ENST00000611736 SLC39A5Q6ZMH5 540 aa29.96■■■□□ 2.39
VEGFA-226ENST00000611736 PCSK9Q8NBP7 692 aaKnown RBP29.96■■■□□ 2.39
VEGFA-226ENST00000611736 MOXD2PA6NHM9 499 aa29.95■■■□□ 2.39
VEGFA-226ENST00000611736 MEIS2O14770 477 aa29.95■■■□□ 2.39
VEGFA-226ENST00000611736 EIF3JO75822 258 aaKnown RBP29.95■■■□□ 2.39
VEGFA-226ENST00000611736 NAPAP54920 295 aa29.95■■■□□ 2.39
VEGFA-226ENST00000611736 TTLL4Q14679 1199 aa29.95■■■□□ 2.39
VEGFA-226ENST00000611736 FSCN1Q16658 493 aaKnown RBP29.95■■■□□ 2.39
VEGFA-226ENST00000611736 Q9Y3F1 56 aa29.95■■■□□ 2.39
VEGFA-226ENST00000611736 PIK3CDO00329 1044 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 PPFIA3O75145 1194 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 ARIH2O95376 493 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 TXNP10599 105 aaKnown RBP29.94■■■□□ 2.38
VEGFA-226ENST00000611736 RTP1P59025 263 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 NKX3-2P78367 333 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 UBE2SQ16763 222 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 TYW1BQ6NUM6 668 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 OR6J1Q8NGC5 347 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 COPS5Q92905 334 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 PHKBQ93100 1093 aa29.94■■■□□ 2.38
VEGFA-226ENST00000611736 STXBP3O00186 592 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 ASGR1P07306 291 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 CCND2P30279 289 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 STK3Q13188 491 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 VSIG10LQ86VR7 867 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 ZNF274Q96GC6 653 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-226ENST00000611736 ZFP91Q96JP5 570 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-226ENST00000611736 ZMYND8Q9ULU4 1186 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-226ENST00000611736 ATP11BQ9Y2G3 1177 aa29.93■■■□□ 2.38
VEGFA-226ENST00000611736 IL17RAQ96F46 866 aa29.92■■■□□ 2.38
VEGFA-226ENST00000611736 STARD7Q9NQZ5 370 aa29.92■■■□□ 2.38
VEGFA-226ENST00000611736 BARHL2Q9NY43 387 aa29.92■■■□□ 2.38
VEGFA-226ENST00000611736 FRMPD4Q14CM0 1322 aa29.92■■■□□ 2.38
VEGFA-226ENST00000611736 NKRFO15226 690 aaKnown RBP eCLIP29.91■■■□□ 2.384e-7■□□□□ 10.1
VEGFA-226ENST00000611736 AKAP17AQ02040 695 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms