RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 DBNDD1Q9H9R9 158 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 DDX25Q9UHL0 483 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 FAM196BA6NMK8 535 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 ZRANB2O95218 330 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 TFRCP02786 760 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 HSPA1LP34931 641 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 WDR59Q6PJI9 974 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 NLGN1Q8N2Q7 840 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 PSTPIP2Q9H939 334 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 PDIA5Q14554 519 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 FKBP15Q5T1M5 1219 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
TRIM46-211ENST00000611379 UNC13DQ70J99 1090 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 NUP58Q9BVL2 599 aa17.8■□□□□ 0.44
TRIM46-211ENST00000611379 ZBTB5O15062 677 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM46-211ENST00000611379 GABPB1Q06547 395 aaPredicted RBP17.79■□□□□ 0.44
TRIM46-211ENST00000611379 HHIPL2Q6UWX4 724 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 KIAA0825Q8IV33 1275 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 ZSCAN29Q8IWY8 852 aaPredicted RBP17.79■□□□□ 0.44
TRIM46-211ENST00000611379 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM46-211ENST00000611379 TFR2Q9UP52 801 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 MYH8P13535 1937 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 RAD54LQ92698 747 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 MYO1AQ9UBC5 1043 aa17.79■□□□□ 0.44
TRIM46-211ENST00000611379 SSBP05455 408 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 CRKP46108 304 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 CENPPQ6IPU0 288 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 CC2D1AQ6P1N0 951 aaPredicted RBP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 KCNK18Q7Z418 384 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 ARFGAP3Q9NP61 516 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 PVALEFA0A1B0GWK0 134 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 ERCC3P19447 782 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 TUBB2AQ13885 445 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 MIIPQ5JXC2 388 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 CCDC122Q5T0U0 273 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 PPP4R3AQ6IN85 833 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 PPP1R18Q6NYC8 613 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 KIAA1328Q86T90 577 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 DDX12PQ92771 950 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 TUBB2BQ9BVA1 445 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 RASSF10A6NK89 507 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 IPO7O95373 1038 aaKnown RBP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 LRRC41Q15345 812 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 COL23A1Q86Y22 540 aaPredicted RBP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 RETREG2Q8NC44 543 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 ZHX1Q9UKY1 873 aaPredicted RBP17.78■□□□□ 0.44
TRIM46-211ENST00000611379 PCDHA12Q9UN75 941 aa17.78■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L15C9J2P7 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L13C9JLJ4 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L11C9JVI0 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L18D6R9N7 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L22D6RA61 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L17D6RBQ6 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L19D6RCP7 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L20D6RJB6 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 ZBED6P86452 979 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L24Q0WX57 530 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 HAUS4Q9H6D7 363 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
TRIM46-211ENST00000611379 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.44
TRIM46-211ENST00000611379 PDE6BP35913 854 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 SLC1A4P43007 532 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 PLA2G4AP47712 749 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 KRT83P78385 493 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 SHROOM1Q2M3G4 852 aaPredicted RBP17.77■□□□□ 0.43
TRIM46-211ENST00000611379 HAS1Q92839 578 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 CCDC17Q96LX7 622 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 TTYH3Q9C0H2 523 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.43
TRIM46-211ENST00000611379 MMP10P09238 476 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 CYLC1P35663 651 aaPredicted RBP17.76■□□□□ 0.43
TRIM46-211ENST00000611379 ECM1Q16610 540 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 NHEJ1Q9H9Q4 299 aaPredicted RBP17.76■□□□□ 0.43
TRIM46-211ENST00000611379 EEF2P13639 858 aaKnown RBP17.76■□□□□ 0.43
TRIM46-211ENST00000611379 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
TRIM46-211ENST00000611379 HERVK_113P62684 666 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 LRRC27Q9C0I9 530 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 PCDHA1Q9Y5I3 950 aa17.76■□□□□ 0.43
TRIM46-211ENST00000611379 CTAGE15A4D2H0 777 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 ENC1O14682 589 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 CTAGE8P0CG41 777 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 COBLL1Q53SF7 1204 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 CTAGE6Q86UF2 777 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 CTAGE4Q8IX94 777 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 GUF1Q8N442 669 aaKnown RBP17.75■□□□□ 0.43
TRIM46-211ENST00000611379 TERF2Q15554 542 aa17.75■□□□□ 0.43
TRIM46-211ENST00000611379 MEA1Q16626 185 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms