RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 NBPF20Q3BBV1 942 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 DGKHQ86XP1 1220 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 KIAA1217Q5T5P2 1943 aa28.57■■■□□ 2.16
CDKN3-211ENST00000611205 VCANP13611 3396 aa28.56■■■□□ 2.16
CDKN3-211ENST00000611205 KDM4AO75164 1064 aa28.56■■■□□ 2.16
CDKN3-211ENST00000611205 TRIP12Q14669 1992 aaPredicted RBP28.56■■■□□ 2.16
CDKN3-211ENST00000611205 CWC27Q6UX04 472 aaKnown RBP28.56■■■□□ 2.16
CDKN3-211ENST00000611205 IQCA1Q86XH1 822 aa28.56■■■□□ 2.16
CDKN3-211ENST00000611205 PNMA1Q8ND90 353 aa28.56■■■□□ 2.16
CDKN3-211ENST00000611205 VWCEQ96DN2 955 aa28.56■■■□□ 2.16
CDKN3-211ENST00000611205 RWDD1Q9H446 243 aaPredicted RBP28.56■■■□□ 2.16
CDKN3-211ENST00000611205 TTLL4Q14679 1199 aa28.55■■■□□ 2.16
CDKN3-211ENST00000611205 CDC37Q16543 378 aaPredicted RBP28.55■■■□□ 2.16
CDKN3-211ENST00000611205 PLEKHM2Q8IWE5 1019 aa28.55■■■□□ 2.16
CDKN3-211ENST00000611205 SMC5Q8IY18 1101 aa28.55■■■□□ 2.16
CDKN3-211ENST00000611205 KAT14Q9H8E8 782 aa28.55■■■□□ 2.16
CDKN3-211ENST00000611205 DIAPH3Q9NSV4 1193 aa28.55■■■□□ 2.16
CDKN3-211ENST00000611205 PFKMP08237 780 aa28.54■■■□□ 2.16
CDKN3-211ENST00000611205 MYOGP15173 224 aa28.54■■■□□ 2.16
CDKN3-211ENST00000611205 ATP2A2P16615 1042 aaKnown RBP28.54■■■□□ 2.16
CDKN3-211ENST00000611205 CHMP4BP1P59074 171 aa28.54■■■□□ 2.16
CDKN3-211ENST00000611205 PPP2R2DQ66LE6 453 aa28.54■■■□□ 2.16
CDKN3-211ENST00000611205 CHD1LQ86WJ1 897 aa28.54■■■□□ 2.16
CDKN3-211ENST00000611205 A6NJR5 290 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 KPNA6O60684 536 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 ARIH2O95376 493 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 CCDC178Q5BJE1 867 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 NFRKBQ6P4R8 1299 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 TBC1D5Q92609 795 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 PCDHA11Q9Y5I1 949 aa28.53■■■□□ 2.16
CDKN3-211ENST00000611205 ABCB11O95342 1321 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 B4E1Z4 1266 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 ADGRF4Q8IZF3 695 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 RGS22Q8NE09 1264 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 THEGQ9P2T0 379 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 NOD1Q9Y239 953 aa28.52■■■□□ 2.16
CDKN3-211ENST00000611205 DHX16O60231 1041 aaKnown RBP28.51■■■□□ 2.15
CDKN3-211ENST00000611205 ACTN1P12814 892 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 AAMPQ13685 434 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 SEPT14Q6ZU15 432 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 RETREG2Q8NC44 543 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 TAAR1Q96RJ0 339 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 ZSCAN10Q96SZ4 725 aaPredicted RBP28.51■■■□□ 2.15
CDKN3-211ENST00000611205 OSBPL3Q9H4L5 887 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 MYH7BA7E2Y1 1941 aa28.51■■■□□ 2.15
CDKN3-211ENST00000611205 SPTBN5Q9NRC6 3674 aaKnown RBP28.5■■■□□ 2.15
CDKN3-211ENST00000611205 NT5C2P49902 561 aa28.5■■■□□ 2.15
CDKN3-211ENST00000611205 PTPN11Q06124 597 aaPredicted RBP28.5■■■□□ 2.15
CDKN3-211ENST00000611205 ASPRV1Q53RT3 343 aa28.5■■■□□ 2.15
CDKN3-211ENST00000611205 IGHDP01880 384 aa28.49■■■□□ 2.15
CDKN3-211ENST00000611205 QRICH1Q2TAL8 776 aa28.49■■■□□ 2.15
CDKN3-211ENST00000611205 SYTL5Q8TDW5 730 aaPredicted RBP28.49■■■□□ 2.15
CDKN3-211ENST00000611205 ATXN2LQ8WWM7 1075 aaKnown RBP28.49■■■□□ 2.15
CDKN3-211ENST00000611205 VAT1LQ9HCJ6 419 aa28.49■■■□□ 2.15
CDKN3-211ENST00000611205 TET1Q8NFU7 2136 aa28.49■■■□□ 2.15
CDKN3-211ENST00000611205 CHD9Q3L8U1 2897 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 HIP1O00291 1037 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 IQCF3P0C7M6 154 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 RFC2P35250 354 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 NUCB1Q02818 461 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 IMMTQ16891 758 aaKnown RBP28.48■■■□□ 2.15
CDKN3-211ENST00000611205 LY6KQ17RY6 165 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 CHST3Q7LGC8 479 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 MCF2L2Q86YR7 1114 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 MICALL1Q8N3F8 863 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 ENAHQ8N8S7 591 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-211ENST00000611205 NSUN6Q8TEA1 469 aaKnown RBP28.48■■■□□ 2.15
CDKN3-211ENST00000611205 AFG1LQ8WV93 481 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 FTOQ9C0B1 505 aaKnown RBP eCLIP28.48■■■□□ 2.15
CDKN3-211ENST00000611205 COL20A1Q9P218 1284 aa28.48■■■□□ 2.15
CDKN3-211ENST00000611205 PITPNM1O00562 1244 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 GH1P01241 217 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 MMP3P08254 477 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 PARP1P09874 1014 aaKnown RBP28.47■■■□□ 2.15
CDKN3-211ENST00000611205 BFSP2Q13515 415 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 TMEM67Q5HYA8 995 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 CCDC62Q6P9F0 684 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 ANKS1AQ92625 1134 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 DSCC1Q9BVC3 393 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 MAF1Q9H063 256 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 ZSWIM5Q9P217 1185 aa28.47■■■□□ 2.15
CDKN3-211ENST00000611205 TTC28Q96AY4 2481 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 CA3P07451 260 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 STXBP2Q15833 593 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 FBXO11Q86XK2 927 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 ASB2Q96Q27 587 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 RMDN3Q96TC7 470 aa28.46■■■□□ 2.15
CDKN3-211ENST00000611205 MRPL11Q9Y3B7 192 aaKnown RBP28.46■■■□□ 2.15
CDKN3-211ENST00000611205 TNFRSF10AO00220 468 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 PTGISQ16647 500 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 ARHGEF16Q5VV41 709 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 SLC9A7Q96T83 725 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 UBAC1Q9BSL1 405 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 KRT23Q9C075 422 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 JMJD4Q9H9V9 463 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 PTPRSQ13332 1948 aa28.45■■■□□ 2.14
CDKN3-211ENST00000611205 EIF2AK2P19525 551 aaKnown RBP28.44■■■□□ 2.14
CDKN3-211ENST00000611205 MRPS5P82675 430 aaKnown RBP28.44■■■□□ 2.14
CDKN3-211ENST00000611205 ARHGAP1Q07960 439 aa28.44■■■□□ 2.14
CDKN3-211ENST00000611205 YTHDC1Q96MU7 727 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms