RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 CCDC62Q6P9F0 684 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 CHD1LQ86WJ1 897 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 NKX2-4Q9H2Z4 354 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
MUC1-222ENST00000610468 SLC28A3Q9HAS3 691 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
MUC1-222ENST00000610468 SLC4A7Q9Y6M7 1214 aa16.29■□□□□ 0.2
MUC1-222ENST00000610468 KDM4AO75164 1064 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
MUC1-222ENST00000610468 RFC2P35250 354 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 PTPN11Q06124 597 aaPredicted RBP16.28■□□□□ 0.2
MUC1-222ENST00000610468 TTLL4Q14679 1199 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
MUC1-222ENST00000610468 USH1GQ495M9 461 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 COPS5Q92905 334 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 UBA5Q9GZZ9 404 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
MUC1-222ENST00000610468 ABCB11O95342 1321 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 ARIH2O95376 493 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 RABGGTBP53611 331 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 ENAHQ8N8S7 591 aaPredicted RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 ZSCAN10Q96SZ4 725 aaPredicted RBP16.27■□□□□ 0.2
MUC1-222ENST00000610468 DSCC1Q9BVC3 393 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 PRDM6Q9NQX0 595 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
MUC1-222ENST00000610468 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.19
MUC1-222ENST00000610468 HIP1O00291 1037 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 IGHDP01880 384 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 B4GALNT3Q6L9W6 998 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 NSUN6Q8TEA1 469 aaKnown RBP16.26■□□□□ 0.19
MUC1-222ENST00000610468 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
MUC1-222ENST00000610468 ZBBXA8MT70 800 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 B4E1Z4 1266 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 IQCF3P0C7M6 154 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 MYOGP15173 224 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
MUC1-222ENST00000610468 GHRHRQ02643 423 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 PPP2R2DQ66LE6 453 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 SESTD1Q86VW0 696 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 MCF2L2Q86YR7 1114 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 IWS1Q96ST2 819 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 THEGQ9P2T0 379 aa16.25■□□□□ 0.19
MUC1-222ENST00000610468 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 MMP3P08254 477 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 BFSP2Q13515 415 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
MUC1-222ENST00000610468 DEFB128Q7Z7B8 93 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 PHOSPHO2Q8TCD6 241 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 AFG1LQ8WV93 481 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 KAT2BQ92831 832 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 SLC9A7Q96T83 725 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 CTNNA3Q9UI47 895 aa16.24■□□□□ 0.19
MUC1-222ENST00000610468 GH1P01241 217 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
MUC1-222ENST00000610468 ACTN1P12814 892 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 IGFBP4P22692 258 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 RBL2Q08999 1139 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 STXBP2Q15833 593 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 RETREG2Q8NC44 543 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
MUC1-222ENST00000610468 KRT23Q9C075 422 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
MUC1-222ENST00000610468 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
MUC1-222ENST00000610468 OPLAHO14841 1288 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 POU3F3P20264 500 aaPredicted RBP16.22■□□□□ 0.19
MUC1-222ENST00000610468 HSD17B4P51659 736 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 LY6KQ17RY6 165 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 SEPT14Q6ZU15 432 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 MTMR8Q96EF0 704 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 IL25Q9H293 177 aa16.22■□□□□ 0.19
MUC1-222ENST00000610468 TRANK1O15050 2925 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 TNFRSF10AO00220 468 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms