RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 TLR2O60603 784 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 CRHR2Q13324 411 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 BAATQ14032 418 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-214ENST00000608108 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
CTCFL-214ENST00000608108 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 SPATA32Q96LK8 384 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-214ENST00000608108 PORCNQ9H237 461 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 MROH8Q9H579 483 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 RTEL1Q9NZ71 1219 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 CLIC4Q9Y696 253 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 PFASO15067 1338 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 CA12O43570 354 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 BCRP11274 1271 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 SREBF1P36956 1147 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-214ENST00000608108 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
CTCFL-214ENST00000608108 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-214ENST00000608108 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.68□□□□□ -0.38
CTCFL-214ENST00000608108 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
CTCFL-214ENST00000608108 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
CTCFL-214ENST00000608108 MCM7P33993 719 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 MAP2K2P36507 400 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 KCTD2Q14681 263 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 STK38Q15208 465 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 ZNF174Q15697 407 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTCFL-214ENST00000608108 CRYGNQ8WXF5 182 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 MMP19Q99542 508 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 MGAMO43451 1857 aa12.67□□□□□ -0.38
CTCFL-214ENST00000608108 YEATS4O95619 227 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 FCER1AP12319 257 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 MCM4P33991 863 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 UBXN2AP68543 259 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 PTPAQ15257 358 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 CSPP1Q1MSJ5 1256 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 C17orf99Q6UX52 265 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-214ENST00000608108 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
CTCFL-214ENST00000608108 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 MCM3APO60318 1980 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 TDP2O95551 362 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 BMP15O95972 392 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 HSPA6P17066 643 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
CTCFL-214ENST00000608108 MAPK4P31152 587 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 USP11P51784 963 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 KCNG4Q8TDN1 519 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
CTCFL-214ENST00000608108 PXMP2Q9NR77 195 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 RCOR1Q9UKL0 485 aa12.66□□□□□ -0.38
CTCFL-214ENST00000608108 ELP1O95163 1332 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 SPTLC2O15270 562 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 EDIL3O43854 480 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 NEMFO60524 1076 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 PGK2P07205 417 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 CYP3A4P08684 503 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
CTCFL-214ENST00000608108 GCFC2P16383 781 aaKnown RBP12.65□□□□□ -0.38
CTCFL-214ENST00000608108 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 ORC2Q13416 577 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-214ENST00000608108 PGM5Q15124 567 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
CTCFL-214ENST00000608108 DDX25Q9UHL0 483 aaKnown RBP12.65□□□□□ -0.38
CTCFL-214ENST00000608108 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
CTCFL-214ENST00000608108 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 SLC37A4O43826 429 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
CTCFL-214ENST00000608108 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-214ENST00000608108 ZNF76P36508 570 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 ME1P48163 572 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-214ENST00000608108 PTGDRQ13258 359 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 NFKBIBQ15653 356 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
CTCFL-214ENST00000608108 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms