RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZNF576Q9H609 170 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 JMJD4Q9H9V9 463 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 IL23AQ9NPF7 189 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 GPHNQ9NQX3 736 aaPredicted RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 COL20A1Q9P218 1284 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 MRPL11Q9Y3B7 192 aaKnown RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 A6NJR5 290 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 GRXCR1A8MXD5 290 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 KLRF2D3W0D1 207 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 KPNA6O60684 536 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 ARIH2O95376 493 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 SUPT20HL2P0C7V6 817 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 CHMLP26374 656 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PBX2P40425 430 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PTH1RQ03431 593 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 TTLL4Q14679 1199 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PPP2R5BQ15173 497 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 BRDTQ58F21 947 aaPredicted RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 CCDC62Q6P9F0 684 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PSRC1Q6PGN9 363 aaPredicted RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 SEPT14Q6ZU15 432 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.89□□□□□ -0.99
CUX1-219ENST00000606749 MAFAQ8NHW3 353 aaPredicted RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 NSUN6Q8TEA1 469 aaKnown RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 RUFY2Q8WXA3 655 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 TIFAQ96CG3 184 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 VWCEQ96DN2 955 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 MTMR8Q96EF0 704 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 IWS1Q96ST2 819 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 RMDN3Q96TC7 470 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 PBX4Q9BYU1 374 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 WNT8AQ9H1J5 351 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 TRMT13Q9NUP7 481 aaKnown RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 U3KPZ7 1027 aaPredicted RBP8.89□□□□□ -0.99
CUX1-219ENST00000606749 PRUNE2Q8WUY3 3088 aa8.89□□□□□ -0.99
CUX1-219ENST00000606749 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 RAD50Q92878 1312 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
CUX1-219ENST00000606749 DHX16O60231 1041 aaKnown RBP8.88□□□□□ -0.99
CUX1-219ENST00000606749 CYP21A2P08686 494 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 CYP2C9P11712 490 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 IRX6P78412 446 aaPredicted RBP8.88□□□□□ -0.99
CUX1-219ENST00000606749 TRDNQ13061 729 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 STXBP2Q15833 593 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 LY6KQ17RY6 165 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 ARHGEF16Q5VV41 709 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 NFRKBQ6P4R8 1299 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 OTOP2Q7RTS6 562 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 RPUSD2Q8IZ73 545 aaKnown RBP8.88□□□□□ -0.99
CUX1-219ENST00000606749 AMNQ9BXJ7 453 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 MAD2L2Q9UI95 211 aa8.88□□□□□ -0.99
CUX1-219ENST00000606749 OPLAHO14841 1288 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 IFIT3O14879 490 aaKnown RBP8.87□□□□□ -0.99
CUX1-219ENST00000606749 ZBTB5O15062 677 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 PPP1R11O60927 126 aaPredicted RBP8.87□□□□□ -0.99
CUX1-219ENST00000606749 EIF3JO75822 258 aaKnown RBP8.87□□□□□ -0.99
CUX1-219ENST00000606749 CFBP00751 764 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 GH1P01241 217 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 NR3C2P08235 984 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 FOSL2P15408 326 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 HSD17B4P51659 736 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 SLC35G1Q2M3R5 365 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 AFG1LQ8WV93 481 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 SCLYQ96I15 445 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 MTIF3Q9H2K0 278 aaKnown RBP8.87□□□□□ -0.99
CUX1-219ENST00000606749 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 PXMP2Q9NR77 195 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 MAP3K20Q9NYL2 800 aaKnown RBP8.87□□□□□ -0.99
CUX1-219ENST00000606749 TAF6LQ9Y6J9 622 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 LAMA4Q16363 1823 aa8.87□□□□□ -0.99
CUX1-219ENST00000606749 E7EWF7 191 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 SGSM2O43147 1006 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 IQCF3P0C7M6 154 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
CUX1-219ENST00000606749 GHRHRQ02643 423 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 PTPN11Q06124 597 aaPredicted RBP8.86□□□□□ -0.99
CUX1-219ENST00000606749 ARHGAP1Q07960 439 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 MAPK8IP2Q13387 824 aaPredicted RBP8.86□□□□□ -0.99
CUX1-219ENST00000606749 GRM4Q14833 912 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 RAB30Q15771 203 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 FAM47CQ5HY64 1035 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 STOX1Q6ZVD7 989 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 CHST3Q7LGC8 479 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 IGDCC4Q8TDY8 1250 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 MAP4K1Q92918 833 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
CUX1-219ENST00000606749 RIOX1Q9H6W3 641 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 MSRAQ9UJ68 235 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
CUX1-219ENST00000606749 PCDHA1Q9Y5I3 950 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 SLC4A7Q9Y6M7 1214 aa8.86□□□□□ -0.99
CUX1-219ENST00000606749 CDH23Q9H251 3354 aa8.85□□□□□ -0.99
CUX1-219ENST00000606749 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
CUX1-219ENST00000606749 ERICH2A1L162 156 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms