RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 FUT2Q10981 343 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 ANKRD40Q6AI12 368 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 TLDC1Q6P9B6 456 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 CACNA2D3Q8IZS8 1091 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
CDCA3-212ENST00000604599 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 BAIAP2L1Q9UHR4 511 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 RTN2O75298 545 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-212ENST00000604599 WHAMMQ8TF30 809 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 LPIN2Q92539 896 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 GREM2Q9H772 168 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
CDCA3-212ENST00000604599 LRRC53A6NM62 1247 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 PHF20L1A8MW92 1017 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 PRPF3O43395 683 aaKnown RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 RAD51CO43502 376 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 ITGA6P23229 1130 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 BRD2P25440 801 aaKnown RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 SLC8A1P32418 973 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 BYSLQ13895 437 aaKnown RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 CDC37Q16543 378 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 GIMAP8Q8ND71 665 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 HVCN1Q96D96 273 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 A0A1W2PQJ5 194 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 HSD17B3P37058 310 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 CCNHP51946 323 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 NLRP5P59047 1200 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 SEC23AQ15436 765 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 CCDC178Q5BJE1 867 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 IQSEC3Q9UPP2 1182 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 CSB-PGBD3P0DP91 1061 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 VEGFAP15692 232 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 ENAHQ8N8S7 591 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 P2RX5Q93086 422 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
CDCA3-212ENST00000604599 CNOT8Q9UFF9 292 aaKnown RBP13.74□□□□□ -0.21
CDCA3-212ENST00000604599 RTL9Q8NET4 1388 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 SNAP23O00161 211 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 HSPA9P38646 679 aaKnown RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 MAP3K12Q12852 859 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 XRCC4Q13426 336 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 TDRD12Q587J7 1177 aaKnown RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 MAGEC3Q8TD91 643 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 RAPGEF5Q92565 580 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 GLI3P10071 1580 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 DCDC2CA8MYV0 355 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 BUB1BO60566 1050 aaPredicted RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 PALMO75781 387 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 ATP6V1G2O95670 118 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 RCAN1P53805 252 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 MYO1EQ12965 1108 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 KCNB1Q14721 858 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 FIGNQ5HY92 759 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 STAMBPL1Q96FJ0 436 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 THOC1Q96FV9 657 aaKnown RBP13.73□□□□□ -0.21
CDCA3-212ENST00000604599 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
CDCA3-212ENST00000604599 MGRN1O60291 552 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 FCER1AP12319 257 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 CCNE1P24864 410 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 LONP1P36776 959 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 PDE4DQ08499 809 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 ZNF844Q08AG5 666 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 STK4Q13043 487 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 UAP1Q16222 522 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 C1orf131Q8NDD1 294 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 ISCA1Q9BUE6 129 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 NOVA2Q9UNW9 492 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 LCA5LO95447 670 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 KCNA4P22459 653 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 HNRNPH3P31942 346 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 GCKP35557 465 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 IFFO1Q0D2I5 559 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 IFIT1BQ5T764 474 aaKnown RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 CATIPQ7Z7H3 387 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms