RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 ARID5AQ03989 594 aa8.24□□□□□ -1.09
TUBE1-205ENST00000603651 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
TUBE1-205ENST00000603651 PEX11GQ96HA9 241 aa8.24□□□□□ -1.09
TUBE1-205ENST00000603651 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
TUBE1-205ENST00000603651 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
TUBE1-205ENST00000603651 PMF1-BGLAPU3KQ54 211 aa8.24□□□□□ -1.09
TUBE1-205ENST00000603651 A0A0G2JLL6 359 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-205ENST00000603651 A0A1B0GTL3 188 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 OTOL1A6NHN0 477 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-205ENST00000603651 SUSD5O60279 629 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 NCAM1P13591 858 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 FXNQ16595 210 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 INF2Q27J81 1249 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 COPS5Q92905 334 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 ZNF408Q9H9D4 720 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 CYP26B1Q9NR63 512 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 ST7Q9NRC1 585 aa8.23□□□□□ -1.09
TUBE1-205ENST00000603651 B8ZZF3 427 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
TUBE1-205ENST00000603651 FBLN1P23142 703 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 ZNF227Q86WZ6 799 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 FRS2Q8WU20 508 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 DPF3Q92784 378 aa8.22□□□□□ -1.09
TUBE1-205ENST00000603651 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
TUBE1-205ENST00000603651 C22orf46C9J442 243 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 FFAR3O14843 346 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 SF1Q15637 639 aaKnown RBP8.21□□□□□ -1.1
TUBE1-205ENST00000603651 PRSS53Q2L4Q9 553 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 MRM1Q6IN84 353 aaKnown RBP8.21□□□□□ -1.1
TUBE1-205ENST00000603651 LINC01356Q8N9X3 169 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 HNRNPLLQ8WVV9 542 aaKnown RBP8.21□□□□□ -1.1
TUBE1-205ENST00000603651 RELTQ969Z4 430 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 TSPAN17Q96FV3 270 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 MMP19Q99542 508 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 TINF2Q9BSI4 451 aa8.21□□□□□ -1.1
TUBE1-205ENST00000603651 GJB6O95452 261 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 FPR2P25090 351 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 SP8Q8IXZ3 490 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 TP53I13Q8NBR0 393 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-205ENST00000603651 SMARCC2Q8TAQ2 1214 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 NPLOC4Q8TAT6 608 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 FNIP1Q8TF40 1166 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 DIO2Q92813 273 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 CHAMP1Q96JM3 812 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 RAPGEFL1Q9UHV5 662 aa8.2□□□□□ -1.1
TUBE1-205ENST00000603651 TMEFF2Q9UIK5 374 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-205ENST00000603651 MEFVO15553 781 aaPredicted RBP8.19□□□□□ -1.1
TUBE1-205ENST00000603651 FGRP09769 529 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
TUBE1-205ENST00000603651 CYP4F3Q08477 520 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 NFIXQ14938 502 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 RNF38Q9H0F5 515 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 XYLT2Q9H1B5 865 aa8.19□□□□□ -1.1
TUBE1-205ENST00000603651 BCL6P41182 706 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 SLC9A5Q14940 896 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 CEP68Q76N32 757 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 ZNF526Q8TF50 670 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-205ENST00000603651 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 NOX5Q96PH1 765 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 AP5M1Q9H0R1 490 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 ADAM7Q9H2U9 754 aa8.18□□□□□ -1.1
TUBE1-205ENST00000603651 TIMM13Q9Y5L4 95 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-205ENST00000603651 ZBTB7AO95365 584 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 HOXC12P31275 282 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 KCNC1P48547 511 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 SLURP1P55000 103 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 ANKS3Q6ZW76 656 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 B3GNT8Q7Z7M8 397 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 DCP2Q8IU60 420 aaKnown RBP8.17□□□□□ -1.1
TUBE1-205ENST00000603651 CCDC103Q8IW40 242 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 PPIL6Q8IXY8 311 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 TRMT2BQ96GJ1 504 aaKnown RBP8.17□□□□□ -1.1
TUBE1-205ENST00000603651 SYT3Q9BQG1 590 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
TUBE1-205ENST00000603651 PRRG2O14669 202 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 MYO1BO43795 1136 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 BUD31P41223 144 aaPredicted RBP8.16□□□□□ -1.1
TUBE1-205ENST00000603651 SMAD4Q13485 552 aaKnown RBP8.16□□□□□ -1.1
TUBE1-205ENST00000603651 VWA3BQ502W6 1294 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 EEPD1Q7L9B9 569 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 CELF2-AS1Q8N7Q2 184 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 PCDHA2Q9Y5H9 948 aa8.16□□□□□ -1.1
TUBE1-205ENST00000603651 NCANO14594 1321 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 AGRPO00253 132 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 FOXD2O60548 495 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-205ENST00000603651 LCP1P13796 627 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 CACNB2Q08289 660 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-205ENST00000603651 IQCEQ6IPM2 695 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 STK32CQ86UX6 486 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 TMEM145Q8NBT3 493 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 ZBTB8AQ96BR9 441 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 LUC7LQ9NQ29 371 aaKnown RBP8.15□□□□□ -1.1
TUBE1-205ENST00000603651 FBXL7Q9UJT9 491 aa8.15□□□□□ -1.1
TUBE1-205ENST00000603651 ARNTLO00327 626 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 SGSM2O43147 1006 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 GRIA2P42262 883 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms