RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 FAM200AQ8TCP9 573 aa25.29■■□□□ 1.64
PPFIA3-212ENST00000602897 CD99L2Q8TCZ2 262 aa25.29■■□□□ 1.64
PPFIA3-212ENST00000602897 TMEM260Q9NX78 707 aa25.29■■□□□ 1.64
PPFIA3-212ENST00000602897 GCFC2P16383 781 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 PKN2Q16513 984 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 LETM2Q2VYF4 491 aa25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 LONRF3Q496Y0 759 aa25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 PPP4R3AQ6IN85 833 aa25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 PHIPQ8WWQ0 1821 aa25.28■■□□□ 1.64
PPFIA3-212ENST00000602897 CCNT1O60563 726 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 HMGCS2P54868 508 aa25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 ZRSR1Q15695 479 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 SPECC1Q5M775 1068 aa25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 RNF214Q8ND24 703 aa25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 AK8Q96MA6 479 aa25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 PARK7Q99497 189 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-212ENST00000602897 POLR2DO15514 142 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 NEMFO60524 1076 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 OR52Z1P0C646 297 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 USP11P51784 963 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 PANK2Q9BZ23 570 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 TUBE1Q9UJT0 475 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 TRIM17Q9Y577 477 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 PIK3CDO00329 1044 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 FDX1P10109 184 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 CYP2C8P10632 490 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 TXLNAP40222 546 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 ANO6Q4KMQ2 910 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 PRPF38AQ8NAV1 312 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 PROCA1Q8NCQ7 364 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 CPA4Q9UI42 421 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 AGTPBP1Q9UPW5 1226 aa25.26■■□□□ 1.63
PPFIA3-212ENST00000602897 C19orf81C9J6K1 198 aa25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 MTMR2Q13614 643 aa25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 ZYXQ15942 572 aaKnown RBP25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 IL17AQ16552 155 aa25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 UBE2SQ16763 222 aa25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 SLC45A1Q9Y2W3 748 aa25.25■■□□□ 1.63
PPFIA3-212ENST00000602897 CCDC85CA6NKD9 419 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 MEIS2O14770 477 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 SLFN14P0C7P3 912 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 BACE1P56817 501 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 MDM2Q00987 491 aaPredicted RBP25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 CCDC173Q0VFZ6 552 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 TREML2Q5T2D2 321 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 MOXD1Q6UVY6 613 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 C17orf99Q6UX52 265 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 OTOP1Q7RTM1 612 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 KIFC2Q96AC6 838 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 EPSTI1Q96J88 318 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 NAT10Q9H0A0 1025 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 TMEM60Q9H2L4 133 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 EFCC1Q9HA90 598 aa25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 MRPL11Q9Y3B7 192 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-212ENST00000602897 SH3D19Q5HYK7 790 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 USP49Q70CQ1 688 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 IQUBQ8NA54 791 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 C12orf42Q96LP6 360 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 SLF1Q9BQI6 1058 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 SERTAD1Q9UHV2 236 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 ABCB11O95342 1321 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 ADGRA2Q96PE1 1338 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 ACTN4O43707 911 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 FBXO46Q6PJ61 603 aaPredicted RBP25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 MTMR9Q96QG7 549 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 PPP1R9BQ96SB3 815 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 CCSER1Q9C0I3 900 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 PTPRFP10586 1907 aa25.23■■□□□ 1.63
PPFIA3-212ENST00000602897 ZNF165P49910 485 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 NLRP12P59046 1061 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 SNAP25P60880 206 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 CAP1Q01518 475 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 KIF22Q14807 665 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 ARHGEF6Q15052 776 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 USH1GQ495M9 461 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 CEP57L1Q8IYX8 460 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 SMCR8Q8TEV9 937 aaPredicted RBP25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 ANO3Q9BYT9 981 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 TMOD4Q9NZQ9 345 aa25.22■■□□□ 1.63
PPFIA3-212ENST00000602897 CYP3A7-CYP3A51PA0A087WV96 503 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L15C9J2P7 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L13C9JLJ4 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L11C9JVI0 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L18D6R9N7 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L22D6RA61 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L17D6RBQ6 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L19D6RCP7 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L20D6RJB6 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 CYP3A7P24462 503 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 LACTBP83111 547 aaPredicted RBP25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L24Q0WX57 530 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 EMILIN3Q9NT22 766 aa25.21■■□□□ 1.63
PPFIA3-212ENST00000602897 SPDYE3A6NKU9 549 aa25.2■■□□□ 1.62
PPFIA3-212ENST00000602897 EDIL3O43854 480 aa25.2■■□□□ 1.62
PPFIA3-212ENST00000602897 PABPC4Q13310 644 aaKnown RBP eCLIP25.2■■□□□ 1.624e-8■■■■□ 20.7
PPFIA3-212ENST00000602897 POSTNQ15063 836 aa25.2■■□□□ 1.62
PPFIA3-212ENST00000602897 CALCRLQ16602 461 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms