RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 YIPF3Q9GZM5 350 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 OPA1O60313 960 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 BUB1BO60566 1050 aaPredicted RBP17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 SEC24CP53992 1094 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 PARP9Q8IXQ6 854 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 TTLL6Q8N841 843 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 NUCKS1Q9H1E3 243 aaKnown RBP17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 A1CFQ9NQ94 594 aaKnown RBP17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 E7EVH7 732 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 CASP1P29466 404 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 RBL2Q08999 1139 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 COA1Q9GZY4 146 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 JADE2Q9NQC1 790 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 C4BP0C0L5 1744 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 GUCY1A3Q02108 690 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 NUP88Q99567 741 aaPredicted RBP17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 VIPAS39Q9H9C1 493 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 SAMSN1Q9NSI8 373 aaKnown RBP17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 PCDHA5Q9Y5H7 936 aa17.02■□□□□ 0.32
PPFIA3-206ENST00000602655 HSF2BPO75031 334 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 HPDP32754 393 aaPredicted RBP17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 TUBB2AQ13885 445 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 NTRK3Q16288 839 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 ANO1Q5XXA6 986 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.31
PPFIA3-206ENST00000602655 MYBL2P10244 700 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 LIFRP42702 1097 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 ETAA1Q9NY74 926 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 MYO1BO43795 1136 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 AFMP43652 599 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 USP14P54578 494 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 KCNB1Q14721 858 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 USP49Q70CQ1 688 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 CNKSR1Q969H4 720 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 MYH3P11055 1940 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 TEX33O43247 280 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 HAUS2Q9NVX0 235 aa17.01■□□□□ 0.31
PPFIA3-206ENST00000602655 KLHL33A6NCF5 533 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 AARSP49588 968 aaKnown RBP eCLIP17■□□□□ 0.31
PPFIA3-206ENST00000602655 MYO1EQ12965 1108 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 PIK3R5Q8WYR1 880 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 COA7Q96BR5 231 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 MMS19Q96T76 1030 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 G3BP2Q9UN86 482 aaKnown RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 A0A1W2PQ27 194 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 A0A1W2PQ64 194 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 A0A1W2PQD8 194 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 FILIP1LQ4L180 1135 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 TMTC2Q8N394 836 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 ARL8AQ96BM9 186 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 TMCO5BA8MYB1 307 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 KLRF2D3W0D1 207 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 FSBPO95073 299 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 RASA1P20936 1047 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 CASP14P31944 242 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 FNTAP49354 379 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 SMTNP53814 917 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 TROAPQ12815 778 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 SEC23AQ15436 765 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
PPFIA3-206ENST00000602655 OGFOD1Q8N543 542 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 HSD3B7Q9H2F3 369 aa17■□□□□ 0.31
PPFIA3-206ENST00000602655 RHBDL3P58872 404 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 ALDH8A1Q9H2A2 487 aaPredicted RBP16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 WNT7AO00755 349 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 MYBL1P10243 752 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 XBP1P17861 261 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 SGMS1Q86VZ5 419 aa16.99■□□□□ 0.31
PPFIA3-206ENST00000602655 FOXN1O15353 648 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 DEXIO95424 95 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 IFNAR1P17181 557 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 CYB5D1Q6P9G0 228 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 TRIM10Q9UDY6 481 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 SAR1BQ9Y6B6 198 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 IPO7O95373 1038 aaKnown RBP16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 IL1R1P14778 569 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms