RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MYOGP15173 224 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 HAND2P61296 217 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 TTLL4Q14679 1199 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 ATXN2LQ8WWM7 1075 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 LNPKQ9C0E8 428 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 WNT8AQ9H1J5 351 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 CTNNA3Q9UI47 895 aa20.87■□□□□ 0.93
SHKBP1-227ENST00000602011 PITPNM1O00562 1244 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 COL9A1P20849 921 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 RETREG2Q8NC44 543 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 IWS1Q96ST2 819 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 THEGQ9P2T0 379 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 PCDHA11Q9Y5I1 949 aa20.86■□□□□ 0.93
SHKBP1-227ENST00000602011 ABCB11O95342 1321 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 MYL3P08590 195 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 TXNP10599 105 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 BFSP2Q13515 415 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 ASPRV1Q53RT3 343 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 PHOSPHO2Q8TCD6 241 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 NSUN6Q8TEA1 469 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 VWCEQ96DN2 955 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 SCLYQ96I15 445 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 ASB2Q96Q27 587 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 KAT14Q9H8E8 782 aa20.85■□□□□ 0.93
SHKBP1-227ENST00000602011 MICALL1Q8N3F8 863 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 PNMA1Q8ND90 353 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 ADAMTS19Q8TE59 1207 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 PPP1R13LQ8WUF5 828 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 DSCC1Q9BVC3 393 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 TSPYL2Q9H2G4 693 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 CNNM2Q9H8M5 875 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 DIAPH3Q9NSV4 1193 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 LCTP09848 1927 aa20.84■□□□□ 0.93
SHKBP1-227ENST00000602011 PARNO95453 639 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 IMMTQ16891 758 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 NBPF20Q3BBV1 942 aa20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 TBC1D10CQ8IV04 446 aa20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 SAMD3Q8N6K7 520 aa20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 KRT23Q9C075 422 aa20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 MAP3K20Q9NYL2 800 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 MRPL11Q9Y3B7 192 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-227ENST00000602011 REV3LO60673 3130 aa20.83■□□□□ 0.92
SHKBP1-227ENST00000602011 ATP2A2P16615 1042 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 NUCB1Q02818 461 aa20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 TRAF1Q13077 416 aa20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 STXBP2Q15833 593 aa20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 CCDC155Q8N6L0 562 aa20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 NECAB3Q96P71 396 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-227ENST00000602011 ZBBXA8MT70 800 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 KDM4AO75164 1064 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 CYP2C9P11712 490 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 FAM47CQ5HY64 1035 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 CCDC62Q6P9F0 684 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 CWC27Q6UX04 472 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 SESTD1Q86VW0 696 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 SLC9A7Q96T83 725 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 NOD1Q9Y239 953 aa20.81■□□□□ 0.92
SHKBP1-227ENST00000602011 KIF28PB7ZC32 967 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 RBAK-RBAKDNI3L0D1 243 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 RFXAPO00287 272 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 GH1P01241 217 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 PARP1P09874 1014 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 IQCF3P0C7M6 154 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 CASTP20810 708 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 MRPS5P82675 430 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 CDC37Q16543 378 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 USH1GQ495M9 461 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 TMEM67Q5HYA8 995 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 PPP2R2DQ66LE6 453 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 ADGRF4Q8IZF3 695 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 CAGE1Q8TC20 777 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
SHKBP1-227ENST00000602011 TCF20Q9UGU0 1960 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 GOLGA8HP0CJ92 632 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 POU3F3P20264 500 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 TFF2Q03403 129 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 DEFB128Q7Z7B8 93 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 SYTL5Q8TDW5 730 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 RMDN3Q96TC7 470 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 ZKSCAN3Q9BRR0 538 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 UBAC1Q9BSL1 405 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 CERS4Q9HA82 394 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 NCOR1O75376 2440 aa20.79■□□□□ 0.92
SHKBP1-227ENST00000602011 NEDD4P46934 1319 aa20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 BAIAP3O94812 1187 aa20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 KCNV1Q6PIU1 500 aa20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 AFAP1L1Q8TED9 768 aa20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-227ENST00000602011 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms