RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 LRCH2Q5VUJ6 765 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 MFSD14CQ5VZR4 134 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 MARK3P27448 753 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 MICALCLQ6ZW33 695 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 EIF2AK2P19525 551 aaKnown RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 UBE2SQ16763 222 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 PTPROQ16827 1216 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 ZBTB8OSQ8IWT0 167 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 TMEM39BQ9GZU3 492 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 USP27XA6NNY8 438 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 CSF1RP07333 972 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 MYZAPP0CAP1 466 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 TMTC1Q8IUR5 882 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 KDM3AQ9Y4C1 1321 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 OPA1O60313 960 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
ZNF558-207ENST00000601372 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
ZNF558-207ENST00000601372 SOWAHDA6NJG2 315 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 TNPO2O14787 897 aaKnown RBP12.21□□□□□ -0.45
ZNF558-207ENST00000601372 MMP1P03956 469 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 CASP14P31944 242 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 HERC4Q5GLZ8 1057 aaPredicted RBP12.21□□□□□ -0.45
ZNF558-207ENST00000601372 GALNT17Q6IS24 598 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 LTN1O94822 1766 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 NMT2O60551 498 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 IVLP07476 585 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 DDIT3P35638 169 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
ZNF558-207ENST00000601372 ATRIPQ8WXE1 791 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 CEP95Q96GE4 821 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 CDC25AP30304 524 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 UBLCP1Q8WVY7 318 aaPredicted RBP12.21□□□□□ -0.45
ZNF558-207ENST00000601372 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 APOL6Q9BWW8 343 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 AGBL3Q8NEM8 1001 aa12.21□□□□□ -0.45
ZNF558-207ENST00000601372 KLRK1P26718 216 aa12.21□□□□□ -0.46
ZNF558-207ENST00000601372 CEP83Q9Y592 693 aa12.21□□□□□ -0.46
ZNF558-207ENST00000601372 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
ZNF558-207ENST00000601372 FCER1AP12319 257 aa12.21□□□□□ -0.46
ZNF558-207ENST00000601372 FAM76AQ8TAV0 307 aa12.21□□□□□ -0.46
ZNF558-207ENST00000601372 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.46
ZNF558-207ENST00000601372 SHPRHQ149N8 1683 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
ZNF558-207ENST00000601372 ASIC2Q16515 512 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
ZNF558-207ENST00000601372 RRAGAQ7L523 313 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 LRRC4BQ9NT99 713 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 CYP4A11Q02928 519 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 PNMA6FA0A0J9YX94 578 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 LRRIQ4A6NIV6 560 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 ECE1P42892 770 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
ZNF558-207ENST00000601372 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 UBE2Q2LH0YL09 131 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 PRPF6O94906 941 aaKnown RBP12.2□□□□□ -0.46
ZNF558-207ENST00000601372 CASP1P29466 404 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 CCL15Q16663 113 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 NT5C3AQ9H0P0 336 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 NLRC4Q9NPP4 1024 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 PAIP2Q9BPZ3 127 aaKnown RBP12.2□□□□□ -0.46
ZNF558-207ENST00000601372 SLC39A2Q9NP94 309 aa12.2□□□□□ -0.46
ZNF558-207ENST00000601372 OR52Z1P0C646 297 aa12.19□□□□□ -0.46
ZNF558-207ENST00000601372 SMC1AQ14683 1233 aaKnown RBP12.19□□□□□ -0.46
ZNF558-207ENST00000601372 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
ZNF558-207ENST00000601372 STAG1Q8WVM7 1258 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms