RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CRYGNQ8WXF5 182 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 SYAP1Q96A49 352 aaPredicted RBP25.63■■□□□ 1.69
IRF3-228ENST00000601291 MRVI1Q9Y6F6 885 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 OR52Z1P0C646 297 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 PRPHP41219 470 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 SLC30A10Q6XR72 485 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 FAM43AQ8N2R8 423 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 FSIP1Q8NA03 581 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 ZNF579Q8NAF0 562 aaKnown RBP25.62■■□□□ 1.69
IRF3-228ENST00000601291 CLIC6Q96NY7 704 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 RBPJLQ9UBG7 517 aa25.62■■□□□ 1.69
IRF3-228ENST00000601291 DDX25Q9UHL0 483 aaKnown RBP25.62■■□□□ 1.69
IRF3-228ENST00000601291 CYP3A4P08684 503 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 CMA1P23946 247 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 GCLCP48506 637 aaPredicted RBP25.61■■□□□ 1.69
IRF3-228ENST00000601291 ANP32EQ9BTT0 268 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 CYP3A7-CYP3A51PA0A087WV96 503 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 EDIL3O43854 480 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 CYP3A7P24462 503 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 CALCRLQ16602 461 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 CAVIN1Q6NZI2 390 aaKnown RBP25.61■■□□□ 1.69
IRF3-228ENST00000601291 DTHD1Q6ZMT9 781 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 NCAPG2Q86XI2 1143 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 POTEDQ86YR6 584 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 MOV10L1Q9BXT6 1211 aaKnown RBP25.61■■□□□ 1.69
IRF3-228ENST00000601291 TMEM60Q9H2L4 133 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 TXNRD2Q9NNW7 524 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 ZCCHC17Q9NP64 241 aaKnown RBP25.61■■□□□ 1.69
IRF3-228ENST00000601291 COL20A1Q9P218 1284 aa25.61■■□□□ 1.69
IRF3-228ENST00000601291 VWA3AA6NCI4 1184 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 MYH7BA7E2Y1 1941 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 PFASO15067 1338 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 ZNF76P36508 570 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 INHBEP58166 350 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 BAATQ14032 418 aaPredicted RBP25.6■■□□□ 1.69
IRF3-228ENST00000601291 RPTORQ8N122 1335 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 PTPN18Q99952 460 aa25.6■■□□□ 1.69
IRF3-228ENST00000601291 SLC37A4O43826 429 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 PEX10O60683 326 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 LIG1P18858 919 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 CIITAP33076 1130 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 ERVK-9P63128 1117 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 ERVK-24P63145 666 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 RESP18Q5W5W9 173 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 SHC4Q6S5L8 630 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 MBOAT7Q96N66 472 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 CSRNP2Q9H175 543 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 A1CFQ9NQ94 594 aaKnown RBP25.59■■□□□ 1.69
IRF3-228ENST00000601291 FAM13BQ9NYF5 915 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 CYP39A1Q9NYL5 469 aa25.59■■□□□ 1.69
IRF3-228ENST00000601291 CCNA1P78396 465 aa25.58■■□□□ 1.69
IRF3-228ENST00000601291 FAM160A1Q05DH4 1040 aa25.58■■□□□ 1.69
IRF3-228ENST00000601291 SREBF2Q12772 1141 aa25.58■■□□□ 1.69
IRF3-228ENST00000601291 ANKRD35Q8N283 1001 aa25.58■■□□□ 1.69
IRF3-228ENST00000601291 GOLPH3LQ9H4A5 285 aa25.58■■□□□ 1.69
IRF3-228ENST00000601291 FRMPD4Q14CM0 1322 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 A0A1B0GVL5 298 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 FAM155AB1AL88 458 aaPredicted RBP25.57■■□□□ 1.68
IRF3-228ENST00000601291 MARCH6O60337 910 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 ERCC3P19447 782 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 LONP1P36776 959 aaKnown RBP25.57■■□□□ 1.68
IRF3-228ENST00000601291 GRIN1Q05586 938 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 Q4G0T1 1027 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 PAXIP1Q6ZW49 1069 aaPredicted RBP25.57■■□□□ 1.68
IRF3-228ENST00000601291 SHCBP1Q8NEM2 672 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 GPRC5AQ8NFJ5 357 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 MROH8Q9H579 483 aa25.57■■□□□ 1.68
IRF3-228ENST00000601291 DDX19AQ9NUU7 478 aaKnown RBP25.57■■□□□ 1.68
IRF3-228ENST00000601291 PFKFB1P16118 471 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 UBXN2AP68543 259 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 MTMR9Q96QG7 549 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 TAAR1Q96RJ0 339 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 RMDN3Q96TC7 470 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 DACT1Q9NYF0 836 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 TMEM266Q2M3C6 531 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 Q3C1V9 767 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 PRR16Q569H4 304 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 ARHGEF16Q5VV41 709 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.56■■□□□ 1.68
IRF3-228ENST00000601291 PXMP2Q9NR77 195 aa25.56■■□□□ 1.68
IRF3-228ENST00000601291 FAM237AA0A1B0GTK4 181 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 FAM86B1E9PN63 330 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 NR1I2O75469 434 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 FAM86B2P0C5J1 330 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 NDUFA8P51970 172 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 PCNX4Q63HM2 1172 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 ANKRD13CQ8N6S4 541 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 TMEM63CQ9P1W3 806 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 MORF4L1Q9UBU8 362 aa25.55■■□□□ 1.68
IRF3-228ENST00000601291 IGF2BP3O00425 579 aaKnown RBP eCLIP25.54■■□□□ 1.68
IRF3-228ENST00000601291 TBX3O15119 743 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 KINO60870 393 aaKnown RBP25.54■■□□□ 1.68
IRF3-228ENST00000601291 EIF2AK2P19525 551 aaKnown RBP25.54■■□□□ 1.68
IRF3-228ENST00000601291 TXKP42681 527 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 PGM5Q15124 567 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 IL17AQ16552 155 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 SPECC1Q5M775 1068 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 CCDC183Q5T5S1 534 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 SLFN12Q8IYM2 578 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 ENGASEQ8NFI3 743 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms