RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 C8orf34Q49A92 452 aa19.44■□□□□ 0.7
TRIM28-215ENST00000601150 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
TRIM28-215ENST00000601150 SENP6Q9GZR1 1112 aaPredicted RBP19.44■□□□□ 0.7
TRIM28-215ENST00000601150 UPF3AQ9H1J1 476 aaKnown RBP19.44■□□□□ 0.7
TRIM28-215ENST00000601150 SPC25Q9HBM1 224 aa19.44■□□□□ 0.7
TRIM28-215ENST00000601150 PXMP2Q9NR77 195 aa19.44■□□□□ 0.7
TRIM28-215ENST00000601150 MKI67P46013 3256 aaKnown RBP19.43■□□□□ 0.7
TRIM28-215ENST00000601150 RBM47A0AV96 593 aaKnown RBP19.43■□□□□ 0.7
TRIM28-215ENST00000601150 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
TRIM28-215ENST00000601150 PDIA3P30101 505 aaKnown RBP19.43■□□□□ 0.7
TRIM28-215ENST00000601150 GJA9P57773 515 aa19.43■□□□□ 0.7
TRIM28-215ENST00000601150 HEATR3Q7Z4Q2 680 aa19.43■□□□□ 0.7
TRIM28-215ENST00000601150 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
TRIM28-215ENST00000601150 V9GY48 417 aaPredicted RBP19.43■□□□□ 0.7
TRIM28-215ENST00000601150 NR3C2P08235 984 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 C6orf222P0C671 652 aaPredicted RBP19.42■□□□□ 0.7
TRIM28-215ENST00000601150 SMPD1P17405 629 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 STXBP2Q15833 593 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 FCHSD1Q86WN1 690 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 KLHDC9Q8NEP7 349 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 GPKOWQ92917 476 aaPredicted RBP eCLIP19.42■□□□□ 0.7
TRIM28-215ENST00000601150 CUL5Q93034 780 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 TSEN34Q9BSV6 310 aaKnown RBP19.42■□□□□ 0.7
TRIM28-215ENST00000601150 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 AP5M1Q9H0R1 490 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 PHF24Q9UPV7 400 aa19.42■□□□□ 0.7
TRIM28-215ENST00000601150 GNEQ9Y223 722 aaKnown RBP19.42■□□□□ 0.7
TRIM28-215ENST00000601150 PIK3CDO00329 1044 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 EVI5O60447 810 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 CST5P28325 142 aaPredicted RBP19.41■□□□□ 0.7
TRIM28-215ENST00000601150 NKX3-2P78367 333 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 DUSP28Q4G0W2 176 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 PRPF38BQ5VTL8 546 aaKnown RBP19.41■□□□□ 0.7
TRIM28-215ENST00000601150 TLK2Q86UE8 772 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 SMARCC2Q8TAQ2 1214 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 SCFD2Q8WU76 684 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 ZNF274Q96GC6 653 aaPredicted RBP19.41■□□□□ 0.7
TRIM28-215ENST00000601150 PDCD2LQ9BRP1 358 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 ALDH8A1Q9H2A2 487 aaPredicted RBP19.41■□□□□ 0.7
TRIM28-215ENST00000601150 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 Q9Y3F1 56 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 NR2E3Q9Y5X4 410 aa19.41■□□□□ 0.7
TRIM28-215ENST00000601150 MYADML2A6NDP7 307 aa19.4■□□□□ 0.7
TRIM28-215ENST00000601150 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
TRIM28-215ENST00000601150 EIF3JO75822 258 aaKnown RBP19.4■□□□□ 0.7
TRIM28-215ENST00000601150 CCT2P78371 535 aaKnown RBP19.4■□□□□ 0.7
TRIM28-215ENST00000601150 GNASQ5JWF2 1037 aa19.4■□□□□ 0.7
TRIM28-215ENST00000601150 WWC2Q6AWC2 1192 aa19.4■□□□□ 0.7
TRIM28-215ENST00000601150 PPP1R18Q6NYC8 613 aa19.4■□□□□ 0.7
TRIM28-215ENST00000601150 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
TRIM28-215ENST00000601150 PCSK9Q8NBP7 692 aaKnown RBP19.4■□□□□ 0.7
TRIM28-215ENST00000601150 RBM27Q9P2N5 1060 aaKnown RBP19.4■□□□□ 0.7
TRIM28-215ENST00000601150 MOXD2PA6NHM9 499 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 MEIS2O14770 477 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 CTAGE5O15320 804 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 DYNC1LI2O43237 492 aaPredicted RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 MYCLP12524 364 aaPredicted RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 CCND2P30279 289 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 ACLYP53396 1101 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 ATN1P54259 1190 aaPredicted RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 NAPAP54920 295 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 IRX5P78411 483 aaPredicted RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 TTLL4Q14679 1199 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 PGM5Q15124 567 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 KCNA10Q16322 511 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 LRRC26Q2I0M4 334 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 TMEM63BQ5T3F8 832 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 CCSAPQ6IQ19 270 aaPredicted RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 USP17L6PQ6QN14 398 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 FERMT2Q96AC1 680 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 LARP6Q9BRS8 491 aaKnown RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 NCOA5Q9HCD5 579 aaKnown RBP19.39■□□□□ 0.69
TRIM28-215ENST00000601150 FRMPD4Q14CM0 1322 aa19.39■□□□□ 0.69
TRIM28-215ENST00000601150 A0A1W2PQ45 241 aaPredicted RBP19.38■□□□□ 0.69
TRIM28-215ENST00000601150 A0A1W2PQY0 241 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 MYH7BA7E2Y1 1941 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 PRPF3O43395 683 aaKnown RBP19.38■□□□□ 0.69
TRIM28-215ENST00000601150 TXNP10599 105 aaKnown RBP19.38■□□□□ 0.69
TRIM28-215ENST00000601150 IFNAR1P17181 557 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 AKAP17AQ02040 695 aaKnown RBP19.38■□□□□ 0.69
TRIM28-215ENST00000601150 ANKRD1Q15327 319 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 NTRK3Q16288 839 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 PFKFB3Q16875 520 aaPredicted RBP19.38■□□□□ 0.69
TRIM28-215ENST00000601150 SLC39A5Q6ZMH5 540 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 SEPT14Q6ZU15 432 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 VSIG10LQ86VR7 867 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 C7orf61Q8IZ16 206 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 IL31RAQ8NI17 732 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 BARHL2Q9NY43 387 aa19.38■□□□□ 0.69
TRIM28-215ENST00000601150 H0YGN5 161 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 STXBP3O00186 592 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 ASGR1P07306 291 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 SCG2P13521 617 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 PTGS1P23219 599 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 BEX3Q00994 111 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 FSCN1Q16658 493 aaKnown RBP19.37■□□□□ 0.69
TRIM28-215ENST00000601150 CCDC62Q6P9F0 684 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 TEX2Q8IWB9 1127 aa19.37■□□□□ 0.69
TRIM28-215ENST00000601150 PHKBQ93100 1093 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms