RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 KPNA6O60684 536 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 PTPN11Q06124 597 aaPredicted RBP19.78■□□□□ 0.76
USE1-208ENST00000600970 PDE4DQ08499 809 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 GRB10Q13322 594 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 RNF207Q6ZRF8 634 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 LRFN3Q9BTN0 628 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 GPCPD1Q9NPB8 672 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 ORC4O43929 436 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 BAIAP3O94812 1187 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 EDNRBP24530 442 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 BFSP2Q13515 415 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 VPS53Q5VIR6 699 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 SPRED2Q7Z698 418 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 OTUD7AQ8TE49 926 aaPredicted RBP19.77■□□□□ 0.76
USE1-208ENST00000600970 SCFD2Q8WU76 684 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 HLA-CQ95604 372 aa19.77■□□□□ 0.76
USE1-208ENST00000600970 LPXNO60711 386 aa19.76■□□□□ 0.75
USE1-208ENST00000600970 FGRP09769 529 aa19.76■□□□□ 0.75
USE1-208ENST00000600970 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
USE1-208ENST00000600970 RPS6P62753 249 aaKnown RBP19.76■□□□□ 0.75
USE1-208ENST00000600970 DNERQ8NFT8 737 aa19.76■□□□□ 0.75
USE1-208ENST00000600970 TMEM47Q9BQJ4 181 aa19.76■□□□□ 0.75
USE1-208ENST00000600970 NOD1Q9Y239 953 aa19.76■□□□□ 0.75
USE1-208ENST00000600970 TXNP10599 105 aaKnown RBP19.75■□□□□ 0.75
USE1-208ENST00000600970 TOP1P11387 765 aaKnown RBP19.75■□□□□ 0.75
USE1-208ENST00000600970 MPHOSPH6Q99547 160 aaKnown RBP19.75■□□□□ 0.75
USE1-208ENST00000600970 ARIH1Q9Y4X5 557 aaPredicted RBP19.75■□□□□ 0.75
USE1-208ENST00000600970 NCOR1O75376 2440 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 ARIH2O95376 493 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 PDHBP11177 359 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 CHMP4BP1P59074 171 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 WDR5P61964 334 aaKnown RBP19.74■□□□□ 0.75
USE1-208ENST00000600970 GPNMBQ14956 572 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 PTGISQ16647 500 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 KHSRPQ92945 711 aaKnown RBP eCLIP19.74■□□□□ 0.75
USE1-208ENST00000600970 CTAGE1Q96RT6 745 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 TOMM22Q9NS69 142 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 TCP11L1Q9NUJ3 509 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 PNMA2Q9UL42 364 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 BDP1A6H8Y1 2624 aa19.74■□□□□ 0.75
USE1-208ENST00000600970 LCHNA4D1U4 455 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 KCNJ6P48051 423 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 ALX1Q15699 326 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 RRP12Q5JTH9 1297 aaKnown RBP19.73■□□□□ 0.75
USE1-208ENST00000600970 TMEM31Q5JXX7 168 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 GDF6Q6KF10 455 aaPredicted RBP19.73■□□□□ 0.75
USE1-208ENST00000600970 TMCO2Q7Z6W1 182 aaPredicted RBP19.73■□□□□ 0.75
USE1-208ENST00000600970 CCDC155Q8N6L0 562 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 AFAP1L1Q8TED9 768 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 HCN4Q9Y3Q4 1203 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 WDR19Q8NEZ3 1342 aa19.73■□□□□ 0.75
USE1-208ENST00000600970 MX1P20591 662 aa19.72■□□□□ 0.75
USE1-208ENST00000600970 ZNF543Q08ER8 600 aa19.72■□□□□ 0.75
USE1-208ENST00000600970 KIAA1217Q5T5P2 1943 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 B4DLN1 442 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 MRPL12P52815 198 aaKnown RBP19.71■□□□□ 0.75
USE1-208ENST00000600970 DEFB103AP81534 67 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 CCDC62Q6P9F0 684 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 SESTD1Q86VW0 696 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 GDPD5Q8WTR4 605 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 AFG1LQ8WV93 481 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 DHX38Q92620 1227 aaKnown RBP19.71■□□□□ 0.75
USE1-208ENST00000600970 LMCD1Q9NZU5 365 aa19.71■□□□□ 0.75
USE1-208ENST00000600970 SIP14410 1827 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 FGAP02671 866 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 MMP3P08254 477 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 SNHG28P0DPA3 235 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 SELPP16109 830 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 CNKSR3Q6P9H4 555 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 LRRC8DQ7L1W4 858 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 RGS22Q8NE09 1264 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 KAT2BQ92831 832 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 ZBED2Q9BTP6 218 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 C11orf16Q9NQ32 467 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 SALL3Q9BXA9 1300 aa19.7■□□□□ 0.74
USE1-208ENST00000600970 GPR37L1O60883 481 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 NBNO60934 754 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 CXCL10P02778 98 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 ARHGAP1Q07960 439 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 RBL2Q08999 1139 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 LY6KQ17RY6 165 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 TCTN1Q2MV58 587 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 USH1GQ495M9 461 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 TTC14Q96N46 770 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 SUGCTQ9HAC7 445 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 CD320Q9NPF0 282 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 PCDHB15Q9Y5E8 787 aa19.69■□□□□ 0.74
USE1-208ENST00000600970 PARNO95453 639 aaKnown RBP19.68■□□□□ 0.74
USE1-208ENST00000600970 GH1P01241 217 aa19.68■□□□□ 0.74
USE1-208ENST00000600970 CKBP12277 381 aa19.68■□□□□ 0.74
USE1-208ENST00000600970 TBC1D5Q92609 795 aa19.68■□□□□ 0.74
USE1-208ENST00000600970 EVI5LQ96CN4 794 aa19.68■□□□□ 0.74
USE1-208ENST00000600970 FAM86C2PA6NEL3 165 aa19.67■□□□□ 0.74
USE1-208ENST00000600970 PI4K2BG5E9Z4 385 aa19.67■□□□□ 0.74
USE1-208ENST00000600970 GJB5O95377 273 aa19.67■□□□□ 0.74
USE1-208ENST00000600970 CASTP20810 708 aaKnown RBP19.67■□□□□ 0.74
USE1-208ENST00000600970 ERVK-21P61565 698 aa19.67■□□□□ 0.74
USE1-208ENST00000600970 SEPT14Q6ZU15 432 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms