RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 DCXO43602 365 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 CALML3P27482 149 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 SLC16A2P36021 539 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 BFSP2Q13515 415 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 RCSD1Q6JBY9 416 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 SLC30A10Q6XR72 485 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 MORC4Q8TE76 937 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 CTAGE1Q96RT6 745 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
HIF3A-219ENST00000600879 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 SYNPO2Q9UMS6 1093 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 BAIAP3O94812 1187 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 ALADP13716 330 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 PDE4BQ07343 736 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 CLUL1Q15846 466 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 PTGISQ16647 500 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 BRDTQ58F21 947 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-219ENST00000600879 NFRKBQ6P4R8 1299 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 DHX38Q92620 1227 aaKnown RBP11.78□□□□□ -0.52
HIF3A-219ENST00000600879 TGS1Q96RS0 853 aaKnown RBP11.78□□□□□ -0.52
HIF3A-219ENST00000600879 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 ECHDC1Q9NTX5 307 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 ADD3Q9UEY8 706 aaKnown RBP11.78□□□□□ -0.52
HIF3A-219ENST00000600879 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
HIF3A-219ENST00000600879 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 TET1Q8NFU7 2136 aa11.78□□□□□ -0.52
HIF3A-219ENST00000600879 TSPY2A6NKD2 308 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
HIF3A-219ENST00000600879 NBNO60934 754 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 CSPG5O95196 566 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 ICAM1P05362 532 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 GNAT2P19087 354 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
HIF3A-219ENST00000600879 ERVK-21P61565 698 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 PPARAQ07869 468 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 PDE4DQ08499 809 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-219ENST00000600879 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
HIF3A-219ENST00000600879 NAPBQ9H115 298 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 FRMPD2Q68DX3 1309 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-219ENST00000600879 RAD50Q92878 1312 aa11.77□□□□□ -0.53
HIF3A-219ENST00000600879 RBM47A0AV96 593 aaKnown RBP11.76□□□□□ -0.53
HIF3A-219ENST00000600879 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 PLA2G6O60733 806 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 ARIH2O95376 493 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 GJB5O95377 273 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
HIF3A-219ENST00000600879 ZP2Q05996 745 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 IER5LQ5T953 404 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 CHST3Q7LGC8 479 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 RAD9AQ99638 391 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 RANBP17Q9H2T7 1088 aaKnown RBP11.76□□□□□ -0.53
HIF3A-219ENST00000600879 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 MUTYHQ9UIF7 546 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
HIF3A-219ENST00000600879 A6NJR5 290 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
HIF3A-219ENST00000600879 MS4A1P11836 297 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 SELPP16109 830 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-219ENST00000600879 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
HIF3A-219ENST00000600879 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 SYDE2Q5VT97 1194 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 RNF207Q6ZRF8 634 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 CCDC155Q8N6L0 562 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 PRSS33Q8NF86 280 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 NEK9Q8TD19 979 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 AFAP1L1Q8TED9 768 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 WNT8BQ93098 351 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 FAM86C1Q9NVL1 165 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
HIF3A-219ENST00000600879 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
HIF3A-219ENST00000600879 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
HIF3A-219ENST00000600879 KPNA6O60684 536 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-219ENST00000600879 IRS1P35568 1242 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
HIF3A-219ENST00000600879 MBTPS1Q14703 1052 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
HIF3A-219ENST00000600879 SORBS3O60504 671 aa11.73□□□□□ -0.53
HIF3A-219ENST00000600879 MMP3P08254 477 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms