RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 USP42Q9H9J4 1324 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 GLI1P08151 1106 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 CCT6AP40227 531 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 KLHL10Q6JEL2 608 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF572Q7Z3I7 529 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 SLC17A8Q8NDX2 589 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 PPP1R14BQ96C90 147 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 MED15Q96RN5 788 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 FAM129AQ9BZQ8 928 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 PLCB1Q9NQ66 1216 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ZRANB1Q9UGI0 708 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 DAAM1Q9Y4D1 1078 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 RNF225M0QZC1 329 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 SH3BGRP55822 239 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 COPS2P61201 443 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 MAGOHP61326 146 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 SLC39A14Q15043 492 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 SPTY2D1Q68D10 685 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ERMNQ8TAM6 284 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 AZIN2Q96A70 460 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 MAGOHBQ96A72 148 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 PSMB7Q99436 277 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 TCHPQ9BT92 498 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 TIPINQ9BVW5 301 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 GDF3Q9NR23 364 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ZSCAN5CA6NGD5 496 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 STX17P56962 302 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 TRIM14Q14142 442 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
NFKB1-212ENST00000600343 MYOCDQ8IZQ8 938 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 ARHGEF3Q9NR81 526 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 KCNH3Q9ULD8 1083 aa10.8□□□□□ -0.68
NFKB1-212ENST00000600343 CRYBG1Q9Y4K1 1723 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 P4HA2O15460 535 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 BCRP11274 1271 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 CTNNA1P35221 906 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 CCNFP41002 786 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 RCN2Q14257 317 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 OLFML2BQ68BL8 750 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 CTNNAL1Q9UBT7 734 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ADGRB1O14514 1584 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 TMEM247A6NEH6 219 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ERCC5P28715 1186 aaPredicted RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 SARSP49591 514 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ERMARDQ5T6L9 678 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 PIGWQ7Z7B1 504 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 MDM1Q8TC05 714 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 KRT23Q9C075 422 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ATP8A2Q9NTI2 1148 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 RBM12Q9NTZ6 932 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ETNK2Q9NVF9 386 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 EHD2Q9NZN4 543 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 PDP2Q9P2J9 529 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 SYNPO2Q9UMS6 1093 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 R3HDM2Q9Y2K5 976 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 ATP7BP35670 1465 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 SALL1Q9NSC2 1324 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 HSPA9P38646 679 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 LSAMPQ13449 338 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 AGBL2Q5U5Z8 902 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 SPATA1Q5VX52 437 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 DZIP1Q86YF9 867 aaKnown RBP10.79□□□□□ -0.68
NFKB1-212ENST00000600343 STK32AQ8WU08 396 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 TMED5Q9Y3A6 229 aa10.79□□□□□ -0.68
NFKB1-212ENST00000600343 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 JCADQ9P266 1359 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 NDUFB5O43674 189 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 CXCR5P32302 372 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF844Q08AG5 666 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 MORC3Q14149 939 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 DDB1Q16531 1140 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 TMEM53Q6P2H8 277 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 FAM136AQ96C01 138 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 LACRTQ9GZZ8 138 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF180Q9UJW8 692 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 EID1Q9Y6B2 187 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 COMMD3-BMI1R4GMX3 469 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 CHL1O00533 1208 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SPATA31D3P0C874 917 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 TROVE2P10155 538 aaKnown RBP eCLIP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 IDO1P14902 403 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 CLCN2P51788 898 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SPATA31D4Q6ZUB0 917 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 KLHDC4Q8TBB5 520 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 NCSTNQ92542 709 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 PPP2R3CQ969Q6 453 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SPATA16Q9BXB7 569 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms