RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 IL27Q8NEV9 243 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 CCDC171Q6TFL3 1326 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 TXNP10599 105 aaKnown RBP20.16■□□□□ 0.82
SMG9-210ENST00000600097 MYOGP15173 224 aa20.16■□□□□ 0.82
SMG9-210ENST00000600097 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
SMG9-210ENST00000600097 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
SMG9-210ENST00000600097 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
SMG9-210ENST00000600097 ZNF589Q86UQ0 364 aaPredicted RBP20.16■□□□□ 0.82
SMG9-210ENST00000600097 ADAMTS19Q8TE59 1207 aa20.16■□□□□ 0.82
SMG9-210ENST00000600097 ESR2Q92731 530 aa20.16■□□□□ 0.82
SMG9-210ENST00000600097 SLC9A7Q96T83 725 aa20.16■□□□□ 0.82
SMG9-210ENST00000600097 CHD7Q9P2D1 2997 aa20.16■□□□□ 0.82
SMG9-210ENST00000600097 BFSP2Q13515 415 aa20.15■□□□□ 0.82
SMG9-210ENST00000600097 DGKHQ86XP1 1220 aa20.15■□□□□ 0.82
SMG9-210ENST00000600097 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
SMG9-210ENST00000600097 NOD1Q9Y239 953 aa20.15■□□□□ 0.82
SMG9-210ENST00000600097 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 IQCF3P0C7M6 154 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 USH1GQ495M9 461 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 TBC1D10CQ8IV04 446 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 COPS5Q92905 334 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 SCN10AQ9Y5Y9 1956 aa20.14■□□□□ 0.81
SMG9-210ENST00000600097 CA3P07451 260 aa20.13■□□□□ 0.81
SMG9-210ENST00000600097 UHRF1Q96T88 793 aaPredicted RBP20.13■□□□□ 0.81
SMG9-210ENST00000600097 FTOQ9C0B1 505 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMG9-210ENST00000600097 MUC3AQ02505 3323 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 GBF1Q92538 1859 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 ZNF213O14771 459 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 GTPBP6O43824 516 aaPredicted RBP20.12■□□□□ 0.81
SMG9-210ENST00000600097 GOLGA8HP0CJ92 632 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 POU3F3P20264 500 aaPredicted RBP20.12■□□□□ 0.81
SMG9-210ENST00000600097 AAK1Q2M2I8 961 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 CCDC62Q6P9F0 684 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 IQCA1Q86XH1 822 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 MICALL1Q8N3F8 863 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 CCDC155Q8N6L0 562 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 RILPL2Q969X0 211 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
SMG9-210ENST00000600097 ABCB11O95342 1321 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 BAIAP3O94812 1187 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 ARIH2O95376 493 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 GH1P01241 217 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 CDC37Q16543 378 aaPredicted RBP20.11■□□□□ 0.81
SMG9-210ENST00000600097 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 CAGE1Q8TC20 777 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 NSUN6Q8TEA1 469 aaKnown RBP20.11■□□□□ 0.81
SMG9-210ENST00000600097 IWS1Q96ST2 819 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 ZKSCAN3Q9BRR0 538 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 UBA5Q9GZZ9 404 aa20.11■□□□□ 0.81
SMG9-210ENST00000600097 NEDD4P46934 1319 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 SDSP20132 328 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 PTGISQ16647 500 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 SESTD1Q86VW0 696 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 HERC6Q8IVU3 1022 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 AFAP1L1Q8TED9 768 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 KAT14Q9H8E8 782 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 NCOR1O75376 2440 aa20.1■□□□□ 0.81
SMG9-210ENST00000600097 MMP3P08254 477 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 CASTP20810 708 aaKnown RBP20.09■□□□□ 0.81
SMG9-210ENST00000600097 COL9A1P20849 921 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 CHMP4BP1P59074 171 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 AAMPQ13685 434 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 SKIV2LQ15477 1246 aaKnown RBP20.09■□□□□ 0.81
SMG9-210ENST00000600097 STXBP2Q15833 593 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 ASPRV1Q53RT3 343 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 SEPT14Q6ZU15 432 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 SYTL5Q8TDW5 730 aaPredicted RBP20.09■□□□□ 0.81
SMG9-210ENST00000600097 PPP1R13LQ8WUF5 828 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 AFG1LQ8WV93 481 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 TAAR1Q96RJ0 339 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 CPVLQ9H3G5 476 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 MTCH2Q9Y6C9 303 aa20.09■□□□□ 0.81
SMG9-210ENST00000600097 KDM4AO75164 1064 aa20.08■□□□□ 0.81
SMG9-210ENST00000600097 PARNO95453 639 aaKnown RBP20.08■□□□□ 0.81
SMG9-210ENST00000600097 KCNJ6P48051 423 aa20.08■□□□□ 0.81
SMG9-210ENST00000600097 ARHGAP1Q07960 439 aa20.08■□□□□ 0.81
SMG9-210ENST00000600097 ADGRF4Q8IZF3 695 aa20.08■□□□□ 0.81
SMG9-210ENST00000600097 RMDN3Q96TC7 470 aa20.08■□□□□ 0.81
SMG9-210ENST00000600097 MRPL11Q9Y3B7 192 aaKnown RBP20.08■□□□□ 0.81
SMG9-210ENST00000600097 RFXAPO00287 272 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 BMP1P13497 986 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 TAP1Q03518 808 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 DGKDQ16760 1214 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 LY6KQ17RY6 165 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 TBC1D5Q92609 795 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
SMG9-210ENST00000600097 CERS4Q9HA82 394 aa20.07■□□□□ 0.8
SMG9-210ENST00000600097 DHX16O60231 1041 aaKnown RBP20.06■□□□□ 0.8
SMG9-210ENST00000600097 SELPP16109 830 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 RBL2Q08999 1139 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 SCN5AQ14524 2016 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 QRICH1Q2TAL8 776 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 GDF6Q6KF10 455 aaPredicted RBP20.06■□□□□ 0.8
SMG9-210ENST00000600097 CHST3Q7LGC8 479 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms