RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CYP2C9P11712 490 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 ACTN1P12814 892 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 ATP2A2P16615 1042 aaKnown RBP24.83■■□□□ 1.57
PNKP-212ENST00000599454 ESR2Q92731 530 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 CRBNQ96SW2 442 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 TRIM6-TRIM34B2RNG4 842 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 PITPNM1O00562 1244 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 RABGGTBP53611 331 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 TTLL4Q14679 1199 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 NBPF20Q3BBV1 942 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 CCDC178Q5BJE1 867 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 FAM47CQ5HY64 1035 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 DGKHQ86XP1 1220 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 ASB2Q96Q27 587 aa24.82■■□□□ 1.56
PNKP-212ENST00000599454 TSPYL2Q9H2G4 693 aaPredicted RBP24.82■■□□□ 1.56
PNKP-212ENST00000599454 PRRC2BQ5JSZ5 2229 aaKnown RBP24.81■■□□□ 1.56
PNKP-212ENST00000599454 MRPS5P82675 430 aaKnown RBP24.81■■□□□ 1.56
PNKP-212ENST00000599454 TBC1D10CQ8IV04 446 aa24.81■■□□□ 1.56
PNKP-212ENST00000599454 MYH7BA7E2Y1 1941 aa24.8■■□□□ 1.56
PNKP-212ENST00000599454 TXNP10599 105 aaKnown RBP24.8■■□□□ 1.56
PNKP-212ENST00000599454 AAMPQ13685 434 aa24.8■■□□□ 1.56
PNKP-212ENST00000599454 DEFB128Q7Z7B8 93 aa24.8■■□□□ 1.56
PNKP-212ENST00000599454 RETREG2Q8NC44 543 aa24.8■■□□□ 1.56
PNKP-212ENST00000599454 SLC9A7Q96T83 725 aa24.8■■□□□ 1.56
PNKP-212ENST00000599454 BFSP2Q13515 415 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 CCDC85BQ15834 202 aaPredicted RBP24.79■■□□□ 1.56
PNKP-212ENST00000599454 TMEM67Q5HYA8 995 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 IQCA1Q86XH1 822 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 PHOSPHO2Q8TCD6 241 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 RILPL2Q969X0 211 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 ABCB11O95342 1321 aa24.79■■□□□ 1.56
PNKP-212ENST00000599454 CHD7Q9P2D1 2997 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 TCF20Q9UGU0 1960 aaKnown RBP24.78■■□□□ 1.56
PNKP-212ENST00000599454 ZNF213O14771 459 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 IQCF3P0C7M6 154 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 USH1GQ495M9 461 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 COPS5Q92905 334 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 LNPKQ9C0E8 428 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 NEDD4P46934 1319 aa24.78■■□□□ 1.56
PNKP-212ENST00000599454 MYOGP15173 224 aa24.77■■□□□ 1.56
PNKP-212ENST00000599454 SDSP20132 328 aa24.77■■□□□ 1.56
PNKP-212ENST00000599454 CDC37Q16543 378 aaPredicted RBP24.77■■□□□ 1.56
PNKP-212ENST00000599454 PNMA1Q8ND90 353 aa24.77■■□□□ 1.56
PNKP-212ENST00000599454 IL27Q8NEV9 243 aa24.77■■□□□ 1.56
PNKP-212ENST00000599454 NOD1Q9Y239 953 aa24.77■■□□□ 1.56
PNKP-212ENST00000599454 GOLGA8HP0CJ92 632 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 CCDC62Q6P9F0 684 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 MCF2L2Q86YR7 1114 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 CCDC155Q8N6L0 562 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 ADAMTS19Q8TE59 1207 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 NSUN6Q8TEA1 469 aaKnown RBP24.76■■□□□ 1.55
PNKP-212ENST00000599454 ANKS1AQ92625 1134 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 ZKSCAN3Q9BRR0 538 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 PTPRSQ13332 1948 aa24.76■■□□□ 1.55
PNKP-212ENST00000599454 ARIH2O95376 493 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 POU3F3P20264 500 aaPredicted RBP24.75■■□□□ 1.55
PNKP-212ENST00000599454 ASPRV1Q53RT3 343 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 SESTD1Q86VW0 696 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 SMC5Q8IY18 1101 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 CAGE1Q8TC20 777 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 IWS1Q96ST2 819 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 UBA5Q9GZZ9 404 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 KAT14Q9H8E8 782 aa24.75■■□□□ 1.55
PNKP-212ENST00000599454 BAIAP3O94812 1187 aa24.74■■□□□ 1.55
PNKP-212ENST00000599454 GH1P01241 217 aa24.74■■□□□ 1.55
PNKP-212ENST00000599454 CA3P07451 260 aa24.74■■□□□ 1.55
PNKP-212ENST00000599454 SYTL5Q8TDW5 730 aaPredicted RBP24.74■■□□□ 1.55
PNKP-212ENST00000599454 FTOQ9C0B1 505 aaKnown RBP eCLIP24.74■■□□□ 1.55
PNKP-212ENST00000599454 OSBPL3Q9H4L5 887 aa24.74■■□□□ 1.55
PNKP-212ENST00000599454 BDP1A6H8Y1 2624 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 KIF28PB7ZC32 967 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 HIP1O00291 1037 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 KDM4AO75164 1064 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 MMP3P08254 477 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 STXBP2Q15833 593 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 PTGISQ16647 500 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 ADGRF4Q8IZF3 695 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 AFAP1L1Q8TED9 768 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 AFG1LQ8WV93 481 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 UHRF1Q96T88 793 aaPredicted RBP24.73■■□□□ 1.55
PNKP-212ENST00000599454 CPVLQ9H3G5 476 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 RWDD1Q9H446 243 aaPredicted RBP24.73■■□□□ 1.55
PNKP-212ENST00000599454 MRPL11Q9Y3B7 192 aaKnown RBP24.73■■□□□ 1.55
PNKP-212ENST00000599454 TRANK1O15050 2925 aa24.73■■□□□ 1.55
PNKP-212ENST00000599454 GTPBP6O43824 516 aaPredicted RBP24.72■■□□□ 1.55
PNKP-212ENST00000599454 AAK1Q2M2I8 961 aa24.72■■□□□ 1.55
PNKP-212ENST00000599454 SEPT14Q6ZU15 432 aa24.72■■□□□ 1.55
PNKP-212ENST00000599454 TAAR1Q96RJ0 339 aa24.72■■□□□ 1.55
PNKP-212ENST00000599454 ZSCAN10Q96SZ4 725 aaPredicted RBP24.72■■□□□ 1.55
PNKP-212ENST00000599454 RMDN3Q96TC7 470 aa24.72■■□□□ 1.55
PNKP-212ENST00000599454 DIAPH3Q9NSV4 1193 aa24.72■■□□□ 1.55
PNKP-212ENST00000599454 PARNO95453 639 aaKnown RBP24.71■■□□□ 1.55
PNKP-212ENST00000599454 CASTP20810 708 aaKnown RBP24.71■■□□□ 1.55
PNKP-212ENST00000599454 ARHGAP1Q07960 439 aa24.71■■□□□ 1.55
PNKP-212ENST00000599454 HERC6Q8IVU3 1022 aa24.71■■□□□ 1.55
PNKP-212ENST00000599454 MICALL1Q8N3F8 863 aa24.71■■□□□ 1.55
PNKP-212ENST00000599454 PARP1P09874 1014 aaKnown RBP24.7■■□□□ 1.54
PNKP-212ENST00000599454 QRICH1Q2TAL8 776 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 CWC27Q6UX04 472 aaKnown RBP24.7■■□□□ 1.54
PNKP-212ENST00000599454 FBXO11Q86XK2 927 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms