RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 IGDCC3Q8IVU1 814 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 FAM169BQ8N8A8 192 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 PANK1Q8TE04 598 aa9.35□□□□□ -0.91
LINC00343-208ENST00000599264 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
LINC00343-208ENST00000599264 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
LINC00343-208ENST00000599264 TNNI3KQ59H18 835 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 LZTR1Q8N653 840 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 MCMBPQ9BTE3 642 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 PARD6AQ9NPB6 346 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 ABCC2Q92887 1545 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 KIF21BO75037 1637 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 TEX14Q8IWB6 1497 aa9.34□□□□□ -0.91
LINC00343-208ENST00000599264 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 ZNF200P98182 395 aaPredicted RBP9.33□□□□□ -0.92
LINC00343-208ENST00000599264 FAM129CQ86XR2 697 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 BVESQ8NE79 360 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 SUSD2Q9UGT4 822 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 NUDT5Q9UKK9 219 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
LINC00343-208ENST00000599264 SASH1O94885 1247 aa9.32□□□□□ -0.92
LINC00343-208ENST00000599264 NCKAP1LP55160 1127 aa9.32□□□□□ -0.92
LINC00343-208ENST00000599264 TMEFF1Q8IYR6 380 aa9.32□□□□□ -0.92
LINC00343-208ENST00000599264 PPP1R14AQ96A00 147 aa9.32□□□□□ -0.92
LINC00343-208ENST00000599264 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 NPHS1O60500 1241 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 KCNH1O95259 989 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 PRR5P85299 388 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 USP33Q8TEY7 942 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 PWWP2AQ96N64 755 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 EMC9Q9Y3B6 208 aa9.31□□□□□ -0.92
LINC00343-208ENST00000599264 EPRSP07814 1512 aaKnown RBP9.31□□□□□ -0.92
LINC00343-208ENST00000599264 ZC3H12DA2A288 527 aaKnown RBP9.3□□□□□ -0.92
LINC00343-208ENST00000599264 CTSWP56202 376 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 LCE4AQ5TA78 99 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 CPNE8Q86YQ8 564 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 MARCH10Q8NA82 808 aaPredicted RBP9.3□□□□□ -0.92
LINC00343-208ENST00000599264 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 EPB41L4AQ9HCS5 686 aaPredicted RBP9.3□□□□□ -0.92
LINC00343-208ENST00000599264 ACTR10Q9NZ32 417 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 APEX2Q9UBZ4 518 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 FAN1Q9Y2M0 1017 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 KIAA0586Q9BVV6 1533 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 PTPRGP23470 1445 aa9.3□□□□□ -0.92
LINC00343-208ENST00000599264 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
LINC00343-208ENST00000599264 GLI4P10075 376 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 TCF3P15923 654 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 NETO2Q8NC67 525 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 KCNC2Q96PR1 638 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
LINC00343-208ENST00000599264 PTPRMP28827 1452 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 SMAD7O15105 426 aaKnown RBP9.28□□□□□ -0.92
LINC00343-208ENST00000599264 NCAM1P13591 858 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 HOXA5P20719 270 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 SLC9A5Q14940 896 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 SP8Q8IXZ3 490 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 ZNF513Q8N8E2 541 aaPredicted RBP9.28□□□□□ -0.92
LINC00343-208ENST00000599264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00343-208ENST00000599264 MRVI1Q9Y6F6 885 aa9.28□□□□□ -0.92
LINC00343-208ENST00000599264 TRIM13O60858 407 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 CAP1Q01518 475 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 SCRN1Q12765 414 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 ALG3Q92685 438 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 COPS5Q92905 334 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 MMP19Q99542 508 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00343-208ENST00000599264 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 GULP1Q9UBP9 304 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 UHRF1BP1LA0JNW5 1464 aa9.27□□□□□ -0.93
LINC00343-208ENST00000599264 ZBTB7AO95365 584 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 IGFBP6P24592 240 aaPredicted RBP9.26□□□□□ -0.93
LINC00343-208ENST00000599264 LARP1BQ659C4 914 aaKnown RBP9.26□□□□□ -0.93
LINC00343-208ENST00000599264 TRIM59Q8IWR1 403 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 FAM178BQ8IXR5 827 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 CLEC1BQ9P126 229 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 LRP2BPQ9P2M1 347 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 PRKAG3Q9UGI9 489 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 HCFC2Q9Y5Z7 792 aa9.26□□□□□ -0.93
LINC00343-208ENST00000599264 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
LINC00343-208ENST00000599264 C7orf72A4D263 438 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 PLS3P13797 630 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 FXNQ16595 210 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 GTF2IRD2BQ6EKJ0 949 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 IQCEQ6IPM2 695 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 C6orf15Q6UXA7 325 aaPredicted RBP9.25□□□□□ -0.93
LINC00343-208ENST00000599264 GTF2IRD2Q86UP8 949 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
LINC00343-208ENST00000599264 DDAH1O94760 285 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 FBLN1P23142 703 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 LIMS1P48059 325 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 FOXO4P98177 505 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 VMACQ2NL98 169 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 SV2CQ496J9 727 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
LINC00343-208ENST00000599264 KRTAP4-7Q9BYR0 210 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms