RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 SNCBQ16143 134 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 PTPROQ16827 1216 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 NAIF1Q69YI7 327 aaPredicted RBP17.22■□□□□ 0.35
TRPM4-209ENST00000598502 LRWD1Q9UFC0 647 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 TOM1O60784 492 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 DDAH1O94760 285 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 HDLBPQ00341 1268 aaKnown RBP17.22■□□□□ 0.35
TRPM4-209ENST00000598502 CNPY4Q8N129 248 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 ARPP21Q9UBL0 812 aaPredicted RBP17.22■□□□□ 0.35
TRPM4-209ENST00000598502 NCK2O43639 380 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 KIF5BP33176 963 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 GUCY2DQ02846 1103 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 PPP2R5BQ15173 497 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
TRPM4-209ENST00000598502 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.35
TRPM4-209ENST00000598502 RPGRIP1Q96KN7 1286 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 USP21Q9UK80 565 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 CCDC194A0A1B0GVG4 234 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 MOCS3O95396 460 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 GCKP35557 465 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 BIRC2Q13490 618 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
TRPM4-209ENST00000598502 MLXIPQ9HAP2 919 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRPM4-209ENST00000598502 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
TRPM4-209ENST00000598502 BUB1O43683 1085 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 UFL1O94874 794 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 CALRP27797 417 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 LSP1P33241 339 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 NAA35Q5VZE5 725 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 MTA3Q9BTC8 594 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 B4DLN1 442 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 NR1D1P20393 614 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 BRD2P25440 801 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 ZIM3Q96PE6 472 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 EPB41L5Q9HCM4 733 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 CICQ96RK0 1608 aaPredicted RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 LRP5O75197 1615 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 SARNPP82979 210 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 INF2Q27J81 1249 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 CPLX4Q7Z7G2 160 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 ZNF473Q8WTR7 871 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 HAUS2Q9NVX0 235 aa17.2■□□□□ 0.34
TRPM4-209ENST00000598502 DDX60Q8IY21 1712 aaKnown RBP17.2■□□□□ 0.34
TRPM4-209ENST00000598502 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 SEMA3EO15041 775 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 RAD21O60216 631 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 TDRD12Q587J7 1177 aaKnown RBP17.19■□□□□ 0.34
TRPM4-209ENST00000598502 CCDC13Q8IYE1 715 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 RCAN1P53805 252 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
TRPM4-209ENST00000598502 SATB1Q01826 763 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 DPYDQ12882 1025 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 CUL4BQ13620 913 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 NPY5RQ15761 445 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 TTMPQ5BVD1 217 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 TCP11X2Q5H9J9 407 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
TRPM4-209ENST00000598502 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 IL17RBQ9NRM6 502 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 REXO2Q9Y3B8 237 aaKnown RBP17.19■□□□□ 0.34
TRPM4-209ENST00000598502 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
TRPM4-209ENST00000598502 KLHL7Q8IXQ5 586 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
TRPM4-209ENST00000598502 ORC4O43929 436 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 BAG3O95817 575 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 SARSP49591 514 aaKnown RBP17.18■□□□□ 0.34
TRPM4-209ENST00000598502 EPHB4P54760 987 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 PICALMQ13492 652 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 TRIM14Q14142 442 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 BLIDQ8IZY5 108 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 CNTNAP4Q9C0A0 1308 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 HERVK_113P62684 666 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
TRPM4-209ENST00000598502 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
TRPM4-209ENST00000598502 NHEJ1Q9H9Q4 299 aaPredicted RBP17.18■□□□□ 0.34
TRPM4-209ENST00000598502 TARSL2A2RTX5 802 aaKnown RBP17.18■□□□□ 0.34
TRPM4-209ENST00000598502 ZSCAN5CA6NGD5 496 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms