RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-222	ENST00000598256	NONO	Q15233	471 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
LTBP4-222	ENST00000598256	PIK3AP1	Q6ZUJ8	805 aa		18.19	■□□□□ 0.5
LTBP4-222	ENST00000598256	NOSTRIN	Q8IVI9	506 aa		18.19	■□□□□ 0.5
LTBP4-222	ENST00000598256	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-222	ENST00000598256	POTEB2	H3BUK9	544 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	GPR25	O00155	361 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	STRN	O43815	780 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	PTPRE	P23469	700 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	U2AF2	P26368	475 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	LACTB	P83111	547 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	REST	Q13127	1097 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	BRAP	Q7Z569	592 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	ABRA	Q8N0Z2	381 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	TNFRSF25	Q93038	417 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	COL20A1	Q9P218	1284 aa		18.18	■□□□□ 0.5
LTBP4-222	ENST00000598256	ADORA2A	P29274	412 aa		18.17	■□□□□ 0.5
LTBP4-222	ENST00000598256	NOL7	Q9UMY1	257 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-222	ENST00000598256	FAM205C	A6NFA0	338 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	SLC15A5	A6NIM6	579 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	PGK2	P07205	417 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	PSMC4	P43686	418 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	GRB14	Q14449	540 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	INF2	Q27J81	1249 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	NOM1	Q5C9Z4	860 aa	Known RBP	18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	ARHGEF16	Q5VV41	709 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	SOCS4	Q8WXH5	440 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	PURB	Q96QR8	312 aa	Known RBP	18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	TAAR1	Q96RJ0	339 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	ADD3	Q9UEY8	706 aa	Known RBP	18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	ZDHHC9	Q9Y397	364 aa		18.16	■□□□□ 0.5
LTBP4-222	ENST00000598256	FKTN	O75072	461 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	EIF2AK2	P19525	551 aa	Known RBP	18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	UBXN2A	P68543	259 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	CNTN2	Q02246	1040 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	EARS2	Q5JPH6	523 aa	Known RBP	18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	DPP9	Q86TI2	863 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	FAM133A	Q8N9E0	248 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	CD99L2	Q8TCZ2	262 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	TBCK	Q8TEA7	893 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	ERO1A	Q96HE7	468 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	RMDN3	Q96TC7	470 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	NUDT12	Q9BQG2	462 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	ARHGAP39	Q9C0H5	1083 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	SLC5A4	Q9NY91	659 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	BRCA2	P51587	3418 aa		18.15	■□□□□ 0.5
LTBP4-222	ENST00000598256	HTT	P42858	3142 aa		18.14	■□□□□ 0.5
LTBP4-222	ENST00000598256	CENPF	P49454	3210 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	DNAJC25-GNG10	A0A024R161	153 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	CTGF	P29279	349 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	SREBF1	P36956	1147 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	ALDH5A1	P51649	535 aa	Predicted RBP	18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	MAP2K5	Q13163	448 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	MYSM1	Q5VVJ2	828 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	NEK8	Q86SG6	692 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	DNER	Q8NFT8	737 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	NSUN6	Q8TEA1	469 aa	Known RBP	18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	MPHOSPH6	Q99547	160 aa	Known RBP	18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	PXMP2	Q9NR77	195 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	ATP6V1D	Q9Y5K8	247 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	FRMPD4	Q14CM0	1322 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256	RPTOR	Q8N122	1335 aa		18.14	■□□□□ 0.49
LTBP4-222	ENST00000598256		B4DLN1	442 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	ATP2B1	P20020	1258 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	ARHGAP4	P98171	946 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	PGM5	Q15124	567 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	RILPL1	Q5EBL4	403 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	MORN1	Q5T089	497 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	TRIM47	Q96LD4	638 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	DOCK5	Q9H7D0	1870 aa		18.13	■□□□□ 0.49
LTBP4-222	ENST00000598256	SOWAHB	A6NEL2	793 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	COBL	O75128	1261 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	RGS2	P41220	211 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	ARHGEF6	Q15052	776 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	LETM2	Q2VYF4	491 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	FAM173B	Q6P4H8	233 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	APBA2	Q99767	749 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	PDCD2L	Q9BRP1	358 aa		18.12	■□□□□ 0.49
LTBP4-222	ENST00000598256	MYCL	P12524	364 aa	Predicted RBP	18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	CCND2	P30279	289 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	ZNF76	P36508	570 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	TRAPPC10	P48553	1259 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	PKN2	Q16513	984 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	ZNF792	Q3KQV3	632 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	TTC38	Q5R3I4	469 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	PCNX4	Q63HM2	1172 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	IL31RA	Q8NI17	732 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	ZNF396	Q96N95	335 aa	Predicted RBP	18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	NAP1L4	Q99733	375 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	ASTN1	O14525	1302 aa		18.11	■□□□□ 0.49
LTBP4-222	ENST00000598256	CCNT1	O60563	726 aa	Known RBP	18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	NR3C2	P08235	984 aa		18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	CYP2B6	P20813	491 aa		18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	HOXD10	P28358	340 aa		18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	PDE4D	Q08499	809 aa		18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	NPLOC4	Q8TAT6	608 aa		18.1	■□□□□ 0.49
LTBP4-222	ENST00000598256	FGD4	Q96M96	766 aa		18.1	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms