RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 SHISA4Q96DD7 197 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 MAML3Q96JK9 1138 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 UIMC1Q96RL1 719 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 MPHOSPH6Q99547 160 aaKnown RBP10.65□□□□□ -0.7
ZNF548-206ENST00000597047 APBA2Q99767 749 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 RTEL1Q9NZ71 1219 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 FLRT1Q9NZU1 646 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 ZHX1Q9UKY1 873 aaPredicted RBP10.65□□□□□ -0.7
ZNF548-206ENST00000597047 PCDHA4Q9UN74 947 aa10.65□□□□□ -0.7
ZNF548-206ENST00000597047 RBBP6Q7Z6E9 1792 aaKnown RBP10.65□□□□□ -0.71
ZNF548-206ENST00000597047 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 ASB14A6NK59 587 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 BTBD18B2RXH4 712 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 B4DLN1 442 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 SORBS3O60504 671 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
ZNF548-206ENST00000597047 GRK4P32298 578 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 HSD17B4P51659 736 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 PRMT2P55345 433 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 NR5A1Q13285 461 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 SLC9C1Q4G0N8 1177 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 SEPT14Q6ZU15 432 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
ZNF548-206ENST00000597047 FAM133AQ8N9E0 248 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
ZNF548-206ENST00000597047 TRIB2Q92519 343 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 ANO3Q9BYT9 981 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 ZMYND12Q9H0C1 365 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 GLT8D2Q9H1C3 349 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 PRDM10Q9NQV6 1147 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 PXMP2Q9NR77 195 aa10.64□□□□□ -0.71
ZNF548-206ENST00000597047 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 MMP1P03956 469 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 NR3C2P08235 984 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 CCND2P30279 289 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 ANO1Q5XXA6 986 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 FBXO46Q6PJ61 603 aaPredicted RBP10.63□□□□□ -0.71
ZNF548-206ENST00000597047 PIK3AP1Q6ZUJ8 805 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 ARMCX2Q7L311 632 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 FBXO16Q8IX29 292 aaPredicted RBP10.63□□□□□ -0.71
ZNF548-206ENST00000597047 USP6NLQ92738 828 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 INTS4Q96HW7 963 aaKnown RBP10.63□□□□□ -0.71
ZNF548-206ENST00000597047 TINF2Q9BSI4 451 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 MCOLN1Q9GZU1 580 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
ZNF548-206ENST00000597047 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 CNPY2Q9Y2B0 182 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 MCM3APO60318 1980 aa10.63□□□□□ -0.71
ZNF548-206ENST00000597047 ESYT2A0FGR8 921 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FAM205CA6NFA0 338 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FOSP01100 380 aaPredicted RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 INHAP05111 366 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 PDCP20941 246 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 IRF5Q13568 498 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 PGM5Q15124 567 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 STXBP2Q15833 593 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 INF2Q27J81 1249 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FOXD4L6Q3SYB3 417 aaPredicted RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FOXD4L3Q6VB84 417 aaPredicted RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FERMT3Q86UX7 667 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 DNERQ8NFT8 737 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 IL31RAQ8NI17 732 aa10.62□□□□□ -0.71
ZNF548-206ENST00000597047 MAP3K20Q9NYL2 800 aaKnown RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 DIS3Q9Y2L1 958 aaKnown RBP10.62□□□□□ -0.71
ZNF548-206ENST00000597047 ASTN1O14525 1302 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 LCTP09848 1927 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 MARCH6O60337 910 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 SNAI1O95863 264 aaPredicted RBP10.61□□□□□ -0.71
ZNF548-206ENST00000597047 HMGCRP04035 888 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 HOXC6P09630 235 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 XRCC5P13010 732 aaKnown RBP10.61□□□□□ -0.71
ZNF548-206ENST00000597047 SYT1P21579 422 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 CACNB2Q08289 660 aaPredicted RBP10.61□□□□□ -0.71
ZNF548-206ENST00000597047 AP3B2Q13367 1082 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 ACVR2BQ13705 512 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 PKN2Q16513 984 aaKnown RBP10.61□□□□□ -0.71
ZNF548-206ENST00000597047 LETM2Q2VYF4 491 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 KRT25Q7Z3Z0 450 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 TBCKQ8TEA7 893 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 FGD4Q96M96 766 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 PDCD2LQ9BRP1 358 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
ZNF548-206ENST00000597047 KIF28PB7ZC32 967 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 STX6O43752 255 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 CCNT1O60563 726 aaKnown RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 CCND3P30281 292 aaPredicted RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 ADCYAP1R1P41586 468 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms