RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 BRF1Q92994 677 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 FERMT2Q96AC1 680 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 TM6SF1Q9BZW5 370 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 SPC25Q9HBM1 224 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 PXMP2Q9NR77 195 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 SEC63Q9UGP8 760 aaKnown RBP24.38■■□□□ 1.49
PNKP-209ENST00000596726 MOXD2PA6NHM9 499 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 GCOM1H8Y6P7 765 aaPredicted RBP24.37■■□□□ 1.49
PNKP-209ENST00000596726 C6orf222P0C671 652 aaPredicted RBP24.37■■□□□ 1.49
PNKP-209ENST00000596726 POLR2MP0CAP2 368 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 ACLYP53396 1101 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 FGD1P98174 961 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 APOBRQ0VD83 1088 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 DUSP28Q4G0W2 176 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 C1orf53Q5VUE5 145 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 RUFY3Q7L099 469 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 CCDC82Q8N4S0 544 aa24.37■■□□□ 1.49
PNKP-209ENST00000596726 CNTNAP5Q8WYK1 1306 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 A0A1W2PQ45 241 aaPredicted RBP24.36■■□□□ 1.49
PNKP-209ENST00000596726 A0A1W2PQY0 241 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 GOLGA8AA7E2F4 631 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 GOLGA8BA8MQT2 603 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 PTGS1P23219 599 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 HOXA13P31271 388 aaPredicted RBP24.36■■□□□ 1.49
PNKP-209ENST00000596726 ARHGEF16Q5VV41 709 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 NOL8Q76FK4 1167 aaKnown RBP24.36■■□□□ 1.49
PNKP-209ENST00000596726 TLK2Q86UE8 772 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 PCSK9Q8NBP7 692 aaKnown RBP24.36■■□□□ 1.49
PNKP-209ENST00000596726 WDR11Q9BZH6 1224 aa24.36■■□□□ 1.49
PNKP-209ENST00000596726 NID2Q14112 1375 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 DYNC1LI2O43237 492 aaPredicted RBP24.35■■□□□ 1.49
PNKP-209ENST00000596726 NR3C2P08235 984 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 CDC27P30260 824 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 EVCP57679 992 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 RTP1P59025 263 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 PPP2R5BQ15173 497 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 GNASQ5JWF2 1037 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 PDCD2LQ9BRP1 358 aa24.35■■□□□ 1.49
PNKP-209ENST00000596726 hCG_1642624A0A1W2PR95 340 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 ASGR1P07306 291 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 EIF2AK2P19525 551 aaKnown RBP24.34■■□□□ 1.49
PNKP-209ENST00000596726 STXBP2Q15833 593 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 SCFD2Q8WU76 684 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 AP5M1Q9H0R1 490 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 CYP46A1Q9Y6A2 500 aa24.34■■□□□ 1.49
PNKP-209ENST00000596726 BEX3Q00994 111 aa24.33■■□□□ 1.49
PNKP-209ENST00000596726 PIK3CDO00329 1044 aa24.32■■□□□ 1.48
PNKP-209ENST00000596726 MEIS2O14770 477 aa24.32■■□□□ 1.48
PNKP-209ENST00000596726 NKRFO15226 690 aaKnown RBP eCLIP24.32■■□□□ 1.48
PNKP-209ENST00000596726 EIF3JO75822 258 aaKnown RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 ARIH2O95376 493 aa24.32■■□□□ 1.48
PNKP-209ENST00000596726 ADD1P35611 737 aaKnown RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 METAP2P50579 478 aaKnown RBP eCLIP24.32■■□□□ 1.48
PNKP-209ENST00000596726 TOB2Q14106 344 aaPredicted RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 FSCN1Q16658 493 aaKnown RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 CCDC62Q6P9F0 684 aa24.32■■□□□ 1.48
PNKP-209ENST00000596726 ZMYND8Q9ULU4 1186 aaPredicted RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 NAP1L2Q9ULW6 460 aaPredicted RBP24.32■■□□□ 1.48
PNKP-209ENST00000596726 FRMPD4Q14CM0 1322 aa24.32■■□□□ 1.48
PNKP-209ENST00000596726 EIF5BO60841 1220 aaKnown RBP24.31■■□□□ 1.48
PNKP-209ENST00000596726 TTLL4Q14679 1199 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 PGM5Q15124 567 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 TRIM60Q495X7 471 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 VSIG10LQ86VR7 867 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 FCHSD1Q86WN1 690 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 STARD7Q9NQZ5 370 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 ATP11BQ9Y2G3 1177 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 ELP1O95163 1332 aa24.31■■□□□ 1.48
PNKP-209ENST00000596726 CCDC196A0A1B0GTZ2 297 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 TXNP10599 105 aaKnown RBP24.3■■□□□ 1.48
PNKP-209ENST00000596726 ANAPC15P60006 121 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 USP17L6PQ6QN14 398 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 SEPT14Q6ZU15 432 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 IL31RAQ8NI17 732 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 IL17RAQ96F46 866 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 GLT1D1Q96MS3 346 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 UPF3BQ9BZI7 483 aaKnown RBP24.3■■□□□ 1.48
PNKP-209ENST00000596726 PRO3102Q9H379 93 aa24.3■■□□□ 1.48
PNKP-209ENST00000596726 V9GY48 417 aaPredicted RBP24.3■■□□□ 1.48
PNKP-209ENST00000596726 SYN1P17600 705 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 PDIA3P30101 505 aaKnown RBP24.29■■□□□ 1.48
PNKP-209ENST00000596726 WWC2Q6AWC2 1192 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 OR6J1Q8NGC5 347 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 COPS5Q92905 334 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 GPKOWQ92917 476 aaPredicted RBP eCLIP24.29■■□□□ 1.48
PNKP-209ENST00000596726 CUL5Q93034 780 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 PSTPIP2Q9H939 334 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 COLQQ9Y215 455 aaPredicted RBP24.29■■□□□ 1.48
PNKP-209ENST00000596726 MYH7BA7E2Y1 1941 aa24.29■■□□□ 1.48
PNKP-209ENST00000596726 ZEB2O60315 1214 aa24.28■■□□□ 1.48
PNKP-209ENST00000596726 RGS20O76081 388 aa24.28■■□□□ 1.48
PNKP-209ENST00000596726 SEC24BO95487 1268 aa24.28■■□□□ 1.48
PNKP-209ENST00000596726 MYCLP12524 364 aaPredicted RBP24.28■■□□□ 1.48
PNKP-209ENST00000596726 HEATR3Q7Z4Q2 680 aa24.28■■□□□ 1.48
PNKP-209ENST00000596726 SMARCC2Q8TAQ2 1214 aa24.28■■□□□ 1.48
PNKP-209ENST00000596726 CABYRO75952 493 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 CCND2P30279 289 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 CDK7P50613 346 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 TLE2Q04725 743 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 NTRK3Q16288 839 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms