RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ZSCAN10Q96SZ4 725 aaPredicted RBP18.84■□□□□ 0.61
LIM2-202ENST00000596399 MTG1Q9BT17 334 aaPredicted RBP18.84■□□□□ 0.61
LIM2-202ENST00000596399 DIAPH3Q9NSV4 1193 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 MSRAQ9UJ68 235 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 ZBBXA8MT70 800 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 TTLL4Q14679 1199 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 CCDC85BQ15834 202 aaPredicted RBP18.83■□□□□ 0.6
LIM2-202ENST00000596399 ENAHQ8N8S7 591 aaPredicted RBP18.83■□□□□ 0.6
LIM2-202ENST00000596399 DNERQ8NFT8 737 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 SCFD2Q8WU76 684 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 SEZ6LQ9BYH1 1024 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 KAT14Q9H8E8 782 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.6
LIM2-202ENST00000596399 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 SCN5AQ14524 2016 aa18.83■□□□□ 0.6
LIM2-202ENST00000596399 A6NJR5 290 aa18.82■□□□□ 0.6
LIM2-202ENST00000596399 LY6KQ17RY6 165 aa18.82■□□□□ 0.6
LIM2-202ENST00000596399 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
LIM2-202ENST00000596399 IQCA1Q86XH1 822 aa18.82■□□□□ 0.6
LIM2-202ENST00000596399 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
LIM2-202ENST00000596399 SLC4A7Q9Y6M7 1214 aa18.82■□□□□ 0.6
LIM2-202ENST00000596399 IGFBP4P22692 258 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 RAB30Q15771 203 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 CHST3Q7LGC8 479 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
LIM2-202ENST00000596399 RGS22Q8NE09 1264 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 SYTL5Q8TDW5 730 aaPredicted RBP18.81■□□□□ 0.6
LIM2-202ENST00000596399 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 MTIF3Q9H2K0 278 aaKnown RBP18.81■□□□□ 0.6
LIM2-202ENST00000596399 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 PNMA2Q9UL42 364 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
LIM2-202ENST00000596399 MUC3AQ02505 3323 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 NKRFO15226 690 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIM2-202ENST00000596399 SUPT20HL2P0C7V6 817 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 STAG2Q8N3U4 1231 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 MPHOSPH6Q99547 160 aaKnown RBP18.8■□□□□ 0.6
LIM2-202ENST00000596399 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
LIM2-202ENST00000596399 ABCB11O95342 1321 aa18.79■□□□□ 0.6
LIM2-202ENST00000596399 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
LIM2-202ENST00000596399 AAMPQ13685 434 aa18.79■□□□□ 0.6
LIM2-202ENST00000596399 IMMTQ16891 758 aaKnown RBP18.79■□□□□ 0.6
LIM2-202ENST00000596399 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
LIM2-202ENST00000596399 XIRP2A4UGR9 3374 aa18.79■□□□□ 0.6
LIM2-202ENST00000596399 RAD50Q92878 1312 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
LIM2-202ENST00000596399 IQCF3P0C7M6 154 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
LIM2-202ENST00000596399 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
LIM2-202ENST00000596399 PDE4AP27815 886 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 ARHGAP1Q07960 439 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 ASPRV1Q53RT3 343 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 CTAGE1Q96RT6 745 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 RMDN3Q96TC7 470 aa18.78■□□□□ 0.6
LIM2-202ENST00000596399 B4DLN1 442 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 RFXAPO00287 272 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 OPLAHO14841 1288 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 PPP1R11O60927 126 aaPredicted RBP18.77■□□□□ 0.6
LIM2-202ENST00000596399 MMP3P08254 477 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 MRPL12P52815 198 aaKnown RBP18.77■□□□□ 0.6
LIM2-202ENST00000596399 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 PPP2R2DQ66LE6 453 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 FBXO11Q86XK2 927 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 NSUN6Q8TEA1 469 aaKnown RBP18.77■□□□□ 0.6
LIM2-202ENST00000596399 KAT2BQ92831 832 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 CERS4Q9HA82 394 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 PCDHA11Q9Y5I1 949 aa18.77■□□□□ 0.6
LIM2-202ENST00000596399 MYO9BQ13459 2157 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 TRANK1O15050 2925 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 HIP1O00291 1037 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 SORBS3O60504 671 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 KPNA6O60684 536 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 ARHGEF15O94989 841 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 CFBP00751 764 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
LIM2-202ENST00000596399 STXBP2Q15833 593 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 GDF6Q6KF10 455 aaPredicted RBP18.76■□□□□ 0.59
LIM2-202ENST00000596399 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 KRT23Q9C075 422 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 MRPL11Q9Y3B7 192 aaKnown RBP18.76■□□□□ 0.59
LIM2-202ENST00000596399 TTC28Q96AY4 2481 aa18.76■□□□□ 0.59
LIM2-202ENST00000596399 GH1P01241 217 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 CA3P07451 260 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 GPNMBQ14956 572 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 SEC23AQ15436 765 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 PTGISQ16647 500 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
LIM2-202ENST00000596399 ARHGEF16Q5VV41 709 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 MCF2L2Q86YR7 1114 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 MICALL1Q8N3F8 863 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms