RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 MFSD5Q6N075 450 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 CHST3Q7LGC8 479 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 OR6J1Q8NGC5 347 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 RMDN3Q96TC7 470 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 SENP2Q9HC62 589 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 COL20A1Q9P218 1284 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 PCDHA1Q9Y5I3 950 aa29.5■■■□□ 2.31
ZNF558-203ENST00000595786 TXNP10599 105 aaKnown RBP29.49■■■□□ 2.31
ZNF558-203ENST00000595786 PTGS1P23219 599 aa29.49■■■□□ 2.31
ZNF558-203ENST00000595786 C9orf50Q5SZB4 431 aa29.49■■■□□ 2.31
ZNF558-203ENST00000595786 CASC1Q6TDU7 716 aa29.49■■■□□ 2.31
ZNF558-203ENST00000595786 DEFB123Q8N688 67 aa29.49■■■□□ 2.31
ZNF558-203ENST00000595786 GRIN2DO15399 1336 aa29.48■■■□□ 2.31
ZNF558-203ENST00000595786 CFBP00751 764 aa29.48■■■□□ 2.31
ZNF558-203ENST00000595786 MCM5P33992 734 aa29.48■■■□□ 2.31
ZNF558-203ENST00000595786 NECTIN1Q15223 517 aa29.48■■■□□ 2.31
ZNF558-203ENST00000595786 TMEM87BQ96K49 555 aa29.48■■■□□ 2.31
ZNF558-203ENST00000595786 PNMA6FA0A0J9YX94 578 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 A6NJR5 290 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 OPLAHO14841 1288 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 SLC27A2O14975 620 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 PPP1R11O60927 126 aaPredicted RBP29.47■■■□□ 2.31
ZNF558-203ENST00000595786 SMARCA1P28370 1054 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 PURAQ00577 322 aaKnown RBP29.47■■■□□ 2.31
ZNF558-203ENST00000595786 SLC35G1Q2M3R5 365 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 ARHGEF16Q5VV41 709 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 CCDC62Q6P9F0 684 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 LY9Q9HBG7 655 aa29.47■■■□□ 2.31
ZNF558-203ENST00000595786 GPHNQ9NQX3 736 aaPredicted RBP29.47■■■□□ 2.31
ZNF558-203ENST00000595786 EIF3JO75822 258 aaKnown RBP29.46■■■□□ 2.31
ZNF558-203ENST00000595786 DDAH1O94760 285 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 KIF5BP33176 963 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 CREB3L3Q68CJ9 461 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 PIGSQ96S52 555 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 MTG1Q9BT17 334 aaPredicted RBP29.46■■■□□ 2.31
ZNF558-203ENST00000595786 ANO2Q9NQ90 1003 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 PXMP2Q9NR77 195 aa29.46■■■□□ 2.31
ZNF558-203ENST00000595786 BAZ2BQ9UIF8 2168 aaKnown RBP29.46■■■□□ 2.31
ZNF558-203ENST00000595786 PRC1O43663 620 aa29.45■■■□□ 2.31
ZNF558-203ENST00000595786 CYTH3O43739 400 aa29.45■■■□□ 2.31
ZNF558-203ENST00000595786 EPHB4P54760 987 aa29.45■■■□□ 2.31
ZNF558-203ENST00000595786 PPIGQ13427 754 aaKnown RBP eCLIP29.45■■■□□ 2.31
ZNF558-203ENST00000595786 TMEM199Q8N511 208 aa29.45■■■□□ 2.31
ZNF558-203ENST00000595786 NR3C2P08235 984 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 LIFRP42702 1097 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 SMAD3P84022 425 aaKnown RBP29.44■■■□□ 2.3
ZNF558-203ENST00000595786 RNF20Q5VTR2 975 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 HOMER1Q86YM7 354 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 ZNF654Q8IZM8 581 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 CTCFLQ8NI51 663 aaPredicted RBP29.44■■■□□ 2.3
ZNF558-203ENST00000595786 LZTS2Q9BRK4 669 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 MTMR10Q9NXD2 777 aa29.44■■■□□ 2.3
ZNF558-203ENST00000595786 GNAQP50148 359 aa29.43■■■□□ 2.3
ZNF558-203ENST00000595786 SPZ1Q9BXG8 430 aa29.43■■■□□ 2.3
ZNF558-203ENST00000595786 ARIH2O95376 493 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 MYL3P08590 195 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 SUPT20HL2P0C7V6 817 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 EIF2AK2P19525 551 aaKnown RBP29.42■■■□□ 2.3
ZNF558-203ENST00000595786 PSMC6P62333 389 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 SEPT14Q6ZU15 432 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 COPS5Q92905 334 aa29.42■■■□□ 2.3
ZNF558-203ENST00000595786 RNPC3Q96LT9 517 aaKnown RBP29.42■■■□□ 2.3
ZNF558-203ENST00000595786 ALDH8A1Q9H2A2 487 aaPredicted RBP29.42■■■□□ 2.3
ZNF558-203ENST00000595786 KIAA1217Q5T5P2 1943 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 GCOM1H8Y6P7 765 aaPredicted RBP29.41■■■□□ 2.3
ZNF558-203ENST00000595786 SH2B2O14492 632 aaPredicted RBP29.41■■■□□ 2.3
ZNF558-203ENST00000595786 GH1P01241 217 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 POLR2MP0CAP2 368 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 CALM1P0DP23 149 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 CALM2P0DP24 149 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 CALM3P0DP25 149 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 Q7L0L9 218 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 PDCD2LQ9BRP1 358 aa29.41■■■□□ 2.3
ZNF558-203ENST00000595786 CCDC69A6NI79 296 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 B4GALT4O60513 344 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 PTPN11Q06124 597 aaPredicted RBP29.4■■■□□ 2.3
ZNF558-203ENST00000595786 KCNV1Q6PIU1 500 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 NFXL1Q6ZNB6 911 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 PPP1R12CQ9BZL4 782 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 TRPV6Q9H1D0 765 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 HIPK3Q9H422 1215 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 DDX41Q9UJV9 622 aaKnown RBP29.4■■■□□ 2.3
ZNF558-203ENST00000595786 SCN10AQ9Y5Y9 1956 aa29.4■■■□□ 2.3
ZNF558-203ENST00000595786 NFRKBQ6P4R8 1299 aa29.39■■■□□ 2.3
ZNF558-203ENST00000595786 VSIG10LQ86VR7 867 aa29.39■■■□□ 2.3
ZNF558-203ENST00000595786 EMID1Q96A84 441 aaPredicted RBP29.39■■■□□ 2.3
ZNF558-203ENST00000595786 LAMA2P24043 3122 aaKnown RBP29.38■■■□□ 2.29
ZNF558-203ENST00000595786 CDC45O75419 566 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 CSF2RAP15509 400 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 ARHGAP1Q07960 439 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 LY6KQ17RY6 165 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 TSGA10IPQ3SY00 556 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 RRP36Q96EU6 259 aaKnown RBP29.38■■■□□ 2.29
ZNF558-203ENST00000595786 NOC4LQ9BVI4 516 aaKnown RBP29.38■■■□□ 2.29
ZNF558-203ENST00000595786 STXBP5LQ9Y2K9 1186 aa29.38■■■□□ 2.29
ZNF558-203ENST00000595786 HOXA13P31271 388 aaPredicted RBP29.37■■■□□ 2.29
ZNF558-203ENST00000595786 CYP2C18P33260 490 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 NBPF20Q3BBV1 942 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 TMEM240Q5SV17 173 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 PSRC1Q6PGN9 363 aaPredicted RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms