RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
LIG1-208ENST00000595758 PDE4DQ08499 809 aa16.51■□□□□ 0.23
LIG1-208ENST00000595758 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
LIG1-208ENST00000595758 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
LIG1-208ENST00000595758 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
LIG1-208ENST00000595758 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
LIG1-208ENST00000595758 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 MSCO60682 206 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
LIG1-208ENST00000595758 EIF2AK2P19525 551 aaKnown RBP16.5■□□□□ 0.23
LIG1-208ENST00000595758 EDNRBP24530 442 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 GJA8P48165 433 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 ADCY7P51828 1080 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 KATNBL1Q9H079 304 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 VTA1Q9NP79 307 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 RIC8AQ9NPQ8 531 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 PXMP2Q9NR77 195 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
LIG1-208ENST00000595758 FAM184BQ9ULE4 1060 aa16.5■□□□□ 0.23
LIG1-208ENST00000595758 LCTP09848 1927 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 NR3C2P08235 984 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
LIG1-208ENST00000595758 UBE2SQ16763 222 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 LHX8Q68G74 356 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 FBXO16Q8IX29 292 aaPredicted RBP16.49■□□□□ 0.23
LIG1-208ENST00000595758 CRISPLD2Q9H0B8 497 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
LIG1-208ENST00000595758 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
LIG1-208ENST00000595758 STK36Q9NRP7 1315 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 MCM3APO60318 1980 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 DTNBO60941 627 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 AKR1A1P14550 325 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 CAPN2P17655 700 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 MCM2P49736 904 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 STXBP2Q15833 593 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 CCDC148Q8NFR7 591 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 ZMYND12Q9H0C1 365 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 C6orf50Q9HD87 102 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
LIG1-208ENST00000595758 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
LIG1-208ENST00000595758 CENPFP49454 3210 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 SPDYE3A6NKU9 549 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 EIF3JO75822 258 aaKnown RBP16.47■□□□□ 0.23
LIG1-208ENST00000595758 RARBP10826 455 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
LIG1-208ENST00000595758 GNA11P29992 359 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 PGM5Q15124 567 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 ANO1Q5XXA6 986 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 TAPT1Q6NXT6 567 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 VSIG10LQ86VR7 867 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 NSUN7Q8NE18 718 aaKnown RBP16.47■□□□□ 0.23
LIG1-208ENST00000595758 WASF1Q92558 559 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 AIFM3Q96NN9 605 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 OGDHLQ9ULD0 1010 aa16.47■□□□□ 0.23
LIG1-208ENST00000595758 JAK2O60674 1132 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 CD2BP2O95400 341 aaKnown RBP16.46■□□□□ 0.23
LIG1-208ENST00000595758 FOSP01100 380 aaPredicted RBP16.46■□□□□ 0.23
LIG1-208ENST00000595758 CCND2P30279 289 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 NLRP5P59047 1200 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 TNFAIP2Q03169 654 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 FAM177A1Q8N128 213 aaPredicted RBP16.46■□□□□ 0.23
LIG1-208ENST00000595758 IL31RAQ8NI17 732 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
LIG1-208ENST00000595758 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
LIG1-208ENST00000595758 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 RBM47A0AV96 593 aaKnown RBP16.45■□□□□ 0.22
LIG1-208ENST00000595758 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
LIG1-208ENST00000595758 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
LIG1-208ENST00000595758 XRRA1Q6P2D8 792 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 SCFD2Q8WU76 684 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 LENG1Q96BZ8 264 aaPredicted RBP16.45■□□□□ 0.22
LIG1-208ENST00000595758 TMX3Q96JJ7 454 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 WDR11Q9BZH6 1224 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 XPNPEP3Q9NQH7 507 aa16.45■□□□□ 0.22
LIG1-208ENST00000595758 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.44■□□□□ 0.22
LIG1-208ENST00000595758 SMPD1P17405 629 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 XBP1P17861 261 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 CLK2P49760 499 aaKnown RBP16.44■□□□□ 0.22
LIG1-208ENST00000595758 AP3B2Q13367 1082 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 MCTP2Q6DN12 878 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms