RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CAPN6Q9Y6Q1 641 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 CYTH3O43739 400 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 GNA11P29992 359 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 PAFAH1B1P43034 410 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 IRAK1P51617 712 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 LRRC63Q05C16 580 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 ITPK1Q13572 414 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 SLC35G1Q2M3R5 365 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 NEK8Q86SG6 692 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 NUCKS1Q9H1E3 243 aaKnown RBP14.71□□□□□ -0.06
VRK3-209ENST00000594948 NDST4Q9H3R1 872 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 SEMA6BQ9H3T3 888 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 C6orf50Q9HD87 102 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 DUSP10Q9Y6W6 482 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 MYH7BA7E2Y1 1941 aa14.71□□□□□ -0.06
VRK3-209ENST00000594948 PSMD2Q13200 908 aa14.7□□□□□ -0.06
VRK3-209ENST00000594948 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.06
VRK3-209ENST00000594948 RIN2Q8WYP3 895 aaPredicted RBP14.7□□□□□ -0.06
VRK3-209ENST00000594948 LRRC1Q9BTT6 524 aa14.7□□□□□ -0.06
VRK3-209ENST00000594948 LRRC27Q9C0I9 530 aa14.7□□□□□ -0.06
VRK3-209ENST00000594948 STIM2Q9P246 746 aa14.7□□□□□ -0.06
VRK3-209ENST00000594948 ATXN2Q99700 1313 aaKnown RBP14.7□□□□□ -0.06
VRK3-209ENST00000594948 ESYT2A0FGR8 921 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 RBAK-RBAKDNI3L0D1 243 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 ZMYND10O75800 440 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 USP17L8P0C7I0 530 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 FCER1AP12319 257 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 EIF4A3P38919 411 aaKnown RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 C3orf67Q6ZVT6 689 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 SV2BQ7L1I2 683 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 C2CD5Q86YS7 1000 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 GSPT2Q8IYD1 628 aaKnown RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 SYN2Q92777 582 aaPredicted RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 PLIN2Q99541 437 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 MMTAG2Q9BU76 263 aaKnown RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 CAPS2Q9BXY5 557 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 DEF6Q9H4E7 631 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 NHSQ6T4R5 1651 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 WTIPA6NIX2 430 aaPredicted RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 hCG_1984214I3L0E3 225 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 EIF3HO15372 352 aaKnown RBP eCLIP14.69□□□□□ -0.06
VRK3-209ENST00000594948 AKR1B10O60218 316 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 MOCS3O95396 460 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 PRDX5P30044 214 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 MAGEA1P43355 309 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
VRK3-209ENST00000594948 ASTE1Q2TB18 679 aaPredicted RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 PDXDC1Q6P996 788 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 KRT26Q7Z3Y9 468 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 TADA2BQ86TJ2 420 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 CERS3Q8IU89 383 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 PROM2Q8N271 834 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 ZNF713Q8N859 430 aaPredicted RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 BAP1Q92560 729 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 MLXIPQ9HAP2 919 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 RIC8AQ9NPQ8 531 aa14.69□□□□□ -0.06
VRK3-209ENST00000594948 DMGDHQ9UI17 866 aaKnown RBP14.69□□□□□ -0.06
VRK3-209ENST00000594948 VGLL3A8MV65 326 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 EBAG9O00559 213 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 HSF2BPO75031 334 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 PLEKP08567 350 aaPredicted RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 NAPAP54920 295 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 PPP4CP60510 307 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 RPS8P62241 208 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 GSTO1P78417 241 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 EMC10Q5UCC4 262 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 DZIP1Q86YF9 867 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 ZNF444Q8N0Y2 327 aaPredicted RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 C1orf131Q8NDD1 294 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 IPO4Q8TEX9 1081 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 TMEM47Q9BQJ4 181 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 LUC7LQ9NQ29 371 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 THRAP3Q9Y2W1 955 aaKnown RBP14.68□□□□□ -0.06
VRK3-209ENST00000594948 FOCADQ5VW36 1801 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 IRS2Q9Y4H2 1338 aa14.68□□□□□ -0.06
VRK3-209ENST00000594948 SHTN1A0MZ66 631 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 GRID2IPA4D2P6 1211 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 CCNT1O60563 726 aaKnown RBP14.67□□□□□ -0.06
VRK3-209ENST00000594948 SEPT2Q15019 361 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 C8orf74Q6P047 294 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 PACS2Q86VP3 889 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 MREGQ8N565 214 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 SMCR8Q8TEV9 937 aaPredicted RBP14.67□□□□□ -0.06
VRK3-209ENST00000594948 NOX5Q96PH1 765 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 GRIN2DO15399 1336 aa14.67□□□□□ -0.06
VRK3-209ENST00000594948 SMCO2A6NFE2 343 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 LRRC53A6NM62 1247 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 KLRK1P26718 216 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms