RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CCDC148Q8NFR7 591 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 GLT8D2Q9H1C3 349 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 RIC8AQ9NPQ8 531 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
DDX39A-221ENST00000593026 ORC3Q9UBD5 711 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-221ENST00000593026 MCM3APO60318 1980 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 DTNBO60941 627 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 MLLT1Q03111 559 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 PDE4DQ08499 809 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 UBE2SQ16763 222 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 PRAMEF19Q5SWL8 479 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 TRPV1Q8NER1 839 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 WASF1Q92558 559 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 TMX3Q96JJ7 454 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 ABHD16BQ9H3Z7 469 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 C6orf50Q9HD87 102 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 PAK6Q9NQU5 681 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 SH3GLB2Q9NR46 395 aa17.15■□□□□ 0.34
DDX39A-221ENST00000593026 ZHX1Q9UKY1 873 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
DDX39A-221ENST00000593026 CENPFP49454 3210 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 LRRC37A2A6NM11 1700 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 JAK2O60674 1132 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 EDNRBP24530 442 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 ACVR2BQ13705 512 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 ZMYND12Q9H0C1 365 aa17.14■□□□□ 0.33
DDX39A-221ENST00000593026 SPDYE3A6NKU9 549 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 SEPT4O43236 478 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 GJB1P08034 283 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 ZNF865P0CJ78 1059 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-221ENST00000593026 XBP1P17861 261 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 GNA11P29992 359 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 NLRP5P59047 1200 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 EEPD1Q7L9B9 569 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-221ENST00000593026 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-221ENST00000593026 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 VTA1Q9NP79 307 aa17.13■□□□□ 0.33
DDX39A-221ENST00000593026 MSCO60682 206 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 NR3C2P08235 984 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
DDX39A-221ENST00000593026 PGM5Q15124 567 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 STXBP2Q15833 593 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 KATNBL1Q9H079 304 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 EHMT1Q9H9B1 1298 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 DDX20Q9UHI6 824 aaKnown RBP17.12■□□□□ 0.33
DDX39A-221ENST00000593026 FAM184BQ9ULE4 1060 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
DDX39A-221ENST00000593026 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 AKR1A1P14550 325 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 CCND2P30279 289 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 IL31RAQ8NI17 732 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
DDX39A-221ENST00000593026 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
DDX39A-221ENST00000593026 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 SGPL1O95470 568 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 GJA8P48165 433 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 SOX10P56693 466 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
DDX39A-221ENST00000593026 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
DDX39A-221ENST00000593026 RARBP10826 455 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 ADCYAP1R1P41586 468 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 TRIM29Q14134 588 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 JAKMIP3Q5VZ66 844 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 LHX8Q68G74 356 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 GALNT17Q6IS24 598 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 TAPT1Q6NXT6 567 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 PGBD1Q96JS3 809 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 PDGFCQ9NRA1 345 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 PCDHA4Q9UN74 947 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
DDX39A-221ENST00000593026 FRMPD3Q5JV73 1810 aa17.08■□□□□ 0.33
DDX39A-221ENST00000593026 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 TFRCP02786 760 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms