RNA–Protein interactions for RNA: ENST00000592706.5

GFAP-223, Transcript of glial fibrillary acidic protein, humanhuman

TSL 4

Gene GFAP, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-223ENST00000592706 PRDM5Q9NQX1 630 aaPredicted RBP11.98□□□□□ -0.49
GFAP-223ENST00000592706 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
GFAP-223ENST00000592706 COL20A1Q9P218 1284 aa11.98□□□□□ -0.49
GFAP-223ENST00000592706 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 REC8O95072 547 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 CLTBP09497 229 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 SMARCA1P28370 1054 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 BEX3Q00994 111 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 TLE2Q04725 743 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 COL9A3Q14050 684 aaPredicted RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 ANKRD33Q7Z3H0 272 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 RRP36Q96EU6 259 aaKnown RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 TAAR1Q96RJ0 339 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 RMDN3Q96TC7 470 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 UBE2OQ9C0C9 1292 aaKnown RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 SEC63Q9UGP8 760 aaKnown RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
GFAP-223ENST00000592706 RANBP2P49792 3224 aaKnown RBP11.97□□□□□ -0.49
GFAP-223ENST00000592706 DCDC2CA8MYV0 355 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 DYNC1LI2O43237 492 aaPredicted RBP11.96□□□□□ -0.49
GFAP-223ENST00000592706 PLEKHA8P1O95397 391 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
GFAP-223ENST00000592706 CPT1AP50416 773 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
GFAP-223ENST00000592706 TTLL4Q14679 1199 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 BRDTQ58F21 947 aaPredicted RBP11.96□□□□□ -0.49
GFAP-223ENST00000592706 SYNE3Q6ZMZ3 975 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 DHX32Q7L7V1 743 aaKnown RBP11.96□□□□□ -0.49
GFAP-223ENST00000592706 TDHQ8IZJ6 230 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 OR6J1Q8NGC5 347 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 PXMP2Q9NR77 195 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
GFAP-223ENST00000592706 FRMPD4Q14CM0 1322 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 GCOM1H8Y6P7 765 aaPredicted RBP11.95□□□□□ -0.5
GFAP-223ENST00000592706 ARVCFO00192 962 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
GFAP-223ENST00000592706 POLR2MP0CAP2 368 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 EIF2AK2P19525 551 aaKnown RBP11.95□□□□□ -0.5
GFAP-223ENST00000592706 RXRAP19793 462 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 PTGS1P23219 599 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 HSPA4P34932 840 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 CDK7P50613 346 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 STXBP2Q15833 593 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 TMEM63BQ5T3F8 832 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 APOA5Q6Q788 366 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 CXCL17Q6UXB2 119 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 KCNB2Q92953 911 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
GFAP-223ENST00000592706 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 EPB41L2O43491 1005 aaKnown RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 NR3C2P08235 984 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 TXNP10599 105 aaKnown RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 RCAN1P53805 252 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 EXOSC10Q01780 885 aaKnown RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 FAAP100Q0VG06 881 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 CCDC62Q6P9F0 684 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 SLC43A3Q8NBI5 491 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 PDCD2LQ9BRP1 358 aa11.94□□□□□ -0.5
GFAP-223ENST00000592706 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
GFAP-223ENST00000592706 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 KPNA6O60684 536 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 EIF3JO75822 258 aaKnown RBP11.93□□□□□ -0.5
GFAP-223ENST00000592706 ARIH2O95376 493 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 RAG1P15918 1043 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 CCND2P30279 289 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 PURAQ00577 322 aaKnown RBP11.93□□□□□ -0.5
GFAP-223ENST00000592706 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 PGM5Q15124 567 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 SEPT14Q6ZU15 432 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 RAB11FIP4Q86YS3 637 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 FAM126BQ8IXS8 530 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 FANCBQ8NB91 859 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 CUL5Q93034 780 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 TCEANC2Q96MN5 208 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
GFAP-223ENST00000592706 TMEM39AQ9NV64 488 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 TBX21Q9UL17 535 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
GFAP-223ENST00000592706 NID2Q14112 1375 aa11.92□□□□□ -0.5
GFAP-223ENST00000592706 GBF1Q92538 1859 aa11.92□□□□□ -0.5
GFAP-223ENST00000592706 A6NJR5 290 aa11.92□□□□□ -0.5
GFAP-223ENST00000592706 GOLGA8AA7E2F4 631 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms