RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 hCG_1984214I3L0E3 225 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 HOXA13P31271 388 aaPredicted RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 ANKRD1Q15327 319 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 ARHGEF16Q5VV41 709 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 EEPD1Q7L9B9 569 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 ZNF713Q8N859 430 aaPredicted RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 DIS3LQ8TF46 1054 aaKnown RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 PAWRQ96IZ0 340 aaKnown RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 IWS1Q96ST2 819 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 XPNPEP3Q9NQH7 507 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 PXMP2Q9NR77 195 aa21.47■■□□□ 1.03
TCF3-216ENST00000592395 RBM27Q9P2N5 1060 aaKnown RBP21.47■■□□□ 1.03
TCF3-216ENST00000592395 DNM1LO00429 736 aa21.46■■□□□ 1.03
TCF3-216ENST00000592395 DUSP11O75319 330 aaKnown RBP21.46■■□□□ 1.03
TCF3-216ENST00000592395 WWC2Q6AWC2 1192 aa21.46■■□□□ 1.03
TCF3-216ENST00000592395 TAPT1Q6NXT6 567 aa21.46■■□□□ 1.03
TCF3-216ENST00000592395 GPKOWQ92917 476 aaPredicted RBP eCLIP21.46■■□□□ 1.03
TCF3-216ENST00000592395 CUL5Q93034 780 aa21.46■■□□□ 1.03
TCF3-216ENST00000592395 LARP6Q9BRS8 491 aaKnown RBP21.46■■□□□ 1.03
TCF3-216ENST00000592395 PIK3CDO00329 1044 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 EIF2AK2P19525 551 aaKnown RBP21.45■■□□□ 1.02
TCF3-216ENST00000592395 ADCYAP1R1P41586 468 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 NEK4P51957 841 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 TNFAIP2Q03169 654 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 NTRK3Q16288 839 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 IQSEC1Q6DN90 963 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 PPP1R18Q6NYC8 613 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 LENG1Q96BZ8 264 aaPredicted RBP21.45■■□□□ 1.02
TCF3-216ENST00000592395 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 C11orf49Q9H6J7 331 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 PSTPIP2Q9H939 334 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
TCF3-216ENST00000592395 KIAA1217Q5T5P2 1943 aa21.45■■□□□ 1.02
TCF3-216ENST00000592395 KBTBD13C9JR72 458 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 ADCY6O43306 1168 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 PRPF3O43395 683 aaKnown RBP21.44■■□□□ 1.02
TCF3-216ENST00000592395 IFNAR1P17181 557 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 AK2P54819 239 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 LRRC41Q15345 812 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 PFKFB3Q16875 520 aaPredicted RBP21.44■■□□□ 1.02
TCF3-216ENST00000592395 RNF180Q86T96 592 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 SMARCC2Q8TAQ2 1214 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 HTATIP2Q9BUP3 242 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 RNF26Q9BY78 433 aaPredicted RBP21.44■■□□□ 1.02
TCF3-216ENST00000592395 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
TCF3-216ENST00000592395 PDGFCQ9NRA1 345 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 CIZ1Q9ULV3 898 aaPredicted RBP21.44■■□□□ 1.02
TCF3-216ENST00000592395 SYNRGQ9UMZ2 1314 aa21.44■■□□□ 1.02
TCF3-216ENST00000592395 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 RBM47A0AV96 593 aaKnown RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 STXBP3O00186 592 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 MEIS2O14770 477 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 ADAMTS4O75173 837 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 PGK1P00558 417 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 NR3C2P08235 984 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 COL6A1P12109 1028 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 SCG2P13521 617 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 RBM25P49756 843 aaKnown RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 NAPAP54920 295 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 AKAP17AQ02040 695 aaKnown RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 STK3Q13188 491 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 STXBP2Q15833 593 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 GJC2Q5T442 439 aaPredicted RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 PHKBQ93100 1093 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 PDCD2LQ9BRP1 358 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 BARHL2Q9NY43 387 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 TPCN1Q9ULQ1 816 aa21.43■■□□□ 1.02
TCF3-216ENST00000592395 MKI67P46013 3256 aaKnown RBP21.43■■□□□ 1.02
TCF3-216ENST00000592395 TNRC18O15417 2968 aaPredicted RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 CPLX1O14810 134 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 SMPD1P17405 629 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 FRMPD4Q14CM0 1322 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 PGM5Q15124 567 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 CPLX2Q6PUV4 134 aaKnown RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 USP17L6PQ6QN14 398 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 NOL8Q76FK4 1167 aaKnown RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 TEX2Q8IWB9 1127 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 SCFD2Q8WU76 684 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 UPF3AQ9H1J1 476 aaKnown RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 SPC25Q9HBM1 224 aa21.42■■□□□ 1.02
TCF3-216ENST00000592395 GNEQ9Y223 722 aaKnown RBP21.42■■□□□ 1.02
TCF3-216ENST00000592395 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
TCF3-216ENST00000592395 NUBP1P53384 320 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 GJA9P57773 515 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 DUSP28Q4G0W2 176 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 TYW1BQ6NUM6 668 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 TRIM22Q8IYM9 498 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 SLC26A6Q9BXS9 759 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 WDR11Q9BZH6 1224 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 Q9Y3F1 56 aa21.41■■□□□ 1.02
TCF3-216ENST00000592395 ALPK3Q96L96 1907 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 PFKFB2O60825 505 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 CST5P28325 142 aaPredicted RBP21.4■■□□□ 1.02
TCF3-216ENST00000592395 CCND2P30279 289 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 NKX3-2P78367 333 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 SCRN1Q12765 414 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 PKN1Q16512 942 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms