RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.7□□□□□ -1.66
DNMT1-226ENST00000592054 USHBP1Q8N6Y0 703 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 MAFAQ8NHW3 353 aaPredicted RBP4.7□□□□□ -1.66
DNMT1-226ENST00000592054 LIN37Q96GY3 246 aaPredicted RBP4.7□□□□□ -1.66
DNMT1-226ENST00000592054 GSX1Q9H4S2 264 aaPredicted RBP4.7□□□□□ -1.66
DNMT1-226ENST00000592054 TMEM39AQ9NV64 488 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 GPRC5DQ9NZD1 345 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 CRIM1Q9NZV1 1036 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 PTPN22Q9Y2R2 807 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 CDH23Q9H251 3354 aa4.7□□□□□ -1.66
DNMT1-226ENST00000592054 ENC1O14682 589 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 CEACAM5P06731 702 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 GSTP1P09211 210 aaKnown RBP4.69□□□□□ -1.66
DNMT1-226ENST00000592054 AMPHP49418 695 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 TAGLNQ01995 201 aaKnown RBP4.69□□□□□ -1.66
DNMT1-226ENST00000592054 AP3B2Q13367 1082 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 LRIT3Q3SXY7 679 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 MPZL3Q6UWV2 235 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 DNAJC14Q6Y2X3 702 aaPredicted RBP4.69□□□□□ -1.66
DNMT1-226ENST00000592054 RASAL3Q86YV0 1011 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 C1QL4Q86Z23 238 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 SULF2Q8IWU5 870 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 KCNB2Q92953 911 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 MASTLQ96GX5 879 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 ERO1AQ96HE7 468 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 ZNF333Q96JL9 665 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 FAM161BQ96MY7 647 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 U3KQE9 123 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 SPTBN4Q9H254 2564 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 WASHC2AQ641Q2 1341 aa4.69□□□□□ -1.66
DNMT1-226ENST00000592054 NFIBO00712 420 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 TMPRSS2O15393 492 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 RNGTTO60942 597 aaKnown RBP4.68□□□□□ -1.66
DNMT1-226ENST00000592054 LEFTY1O75610 366 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 CELA3AP09093 270 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 BMP6P22004 513 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 MRE11P49959 708 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 SREBF2Q12772 1141 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 IKZF1Q13422 519 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 ALG1LQ6GMV1 187 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 KRT26Q7Z3Y9 468 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 GUCD1Q96NT3 240 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 DUSP9Q99956 384 aaKnown RBP4.68□□□□□ -1.66
DNMT1-226ENST00000592054 GZF1Q9H116 711 aaPredicted RBP4.68□□□□□ -1.66
DNMT1-226ENST00000592054 C12orf49Q9H741 205 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 PPP4R2Q9NY27 417 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 PGAP2Q9UHJ9 254 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 PCDHGC5Q9Y5F6 944 aa4.68□□□□□ -1.66
DNMT1-226ENST00000592054 ANKRD11Q6UB99 2663 aaPredicted RBP4.68□□□□□ -1.66
DNMT1-226ENST00000592054 PATL2C9JE40 543 aaKnown RBP4.67□□□□□ -1.66
DNMT1-226ENST00000592054 RBAK-RBAKDNI3L0D1 243 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 USP17L7P0C7H9 530 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 C1QTNF9P0C862 333 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 SRGNP10124 158 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 ARNTP27540 789 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 GSTT1P30711 240 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 BMP8BP34820 402 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 OXCT1P55809 520 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 ST5P78524 1137 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 ZP2Q05996 745 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NBPF6Q5VWK0 638 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 PRR23BQ6ZRT6 265 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 TTLL10Q6ZVT0 673 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NME9Q86XW9 330 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NPAS4Q8IUM7 802 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NIM1KQ8IY84 436 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
DNMT1-226ENST00000592054 TDHQ8IZJ6 230 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 GPBAR1Q8TDU6 330 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 FBF1Q8TES7 1133 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NBPF4Q96M43 638 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NECAB3Q96P71 396 aaPredicted RBP4.67□□□□□ -1.66
DNMT1-226ENST00000592054 BCL2L13Q9BXK5 485 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 ATXN3LQ9H3M9 355 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 MKNK2Q9HBH9 465 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 CBX8Q9HC52 389 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 NARFQ9UHQ1 456 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 PLAGL2Q9UPG8 496 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 SPG7Q9UQ90 795 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 CSADQ9Y600 493 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 KDM3BQ7LBC6 1761 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 MRC1P22897 1456 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 KIF7Q2M1P5 1343 aa4.67□□□□□ -1.66
DNMT1-226ENST00000592054 TJP1Q07157 1748 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 ATRXP46100 2492 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 ZNF609O15014 1411 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 XRCC5P13010 732 aaKnown RBP4.66□□□□□ -1.66
DNMT1-226ENST00000592054 NME2P22392 152 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 HOXC9P31274 260 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 AFMP43652 599 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 TM4SF4P48230 202 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 ATP2B2Q01814 1243 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 PPP2R3AQ06190 1150 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 ZNF252P-AS1Q0IIN9 211 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 ARHGEF6Q15052 776 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 KIF4BQ2VIQ3 1234 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 PRR5LQ6MZQ0 368 aa4.66□□□□□ -1.66
DNMT1-226ENST00000592054 CNBD1Q8NA66 436 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms