RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 UPF2Q9HAU5 1272 aaKnown RBP13.12□□□□□ -0.31
SNHG16-208ENST00000591956 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
SNHG16-208ENST00000591956 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
SNHG16-208ENST00000591956 LCTP09848 1927 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 MCM3APO60318 1980 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 MEIS2O14770 477 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 COL6A1P12109 1028 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 NEK4P51957 841 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 PDE4DQ08499 809 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 KCNV1Q6PIU1 500 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 CCDC82Q8N4S0 544 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 CUL5Q93034 780 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
SNHG16-208ENST00000591956 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
SNHG16-208ENST00000591956 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 PFKFB2O60825 505 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 CDKL5O76039 1030 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
SNHG16-208ENST00000591956 NR3C2P08235 984 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 GJA9P57773 515 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 AKAP17AQ02040 695 aaKnown RBP13.1□□□□□ -0.31
SNHG16-208ENST00000591956 PKN1Q16512 942 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 RNF180Q86T96 592 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 KIF2CQ99661 725 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 HTATIP2Q9BUP3 242 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 SEZ6LQ9BYH1 1024 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
SNHG16-208ENST00000591956 SPC25Q9HBM1 224 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 RIC8AQ9NPQ8 531 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
SNHG16-208ENST00000591956 CPLX1O14810 134 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 MAFGO15525 162 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 ADAMTS4O75173 837 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 SCG2P13521 617 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 GNA11P29992 359 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 AK2P54819 239 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 TNFAIP2Q03169 654 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 TRIM22Q8IYM9 498 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 PCSK9Q8NBP7 692 aaKnown RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 PAWRQ96IZ0 340 aaKnown RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 PURBQ96QR8 312 aaKnown RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 SLKQ9H2G2 1235 aaPredicted RBP13.09□□□□□ -0.31
SNHG16-208ENST00000591956 XPNPEP3Q9NQH7 507 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 TPCN1Q9ULQ1 816 aa13.09□□□□□ -0.31
SNHG16-208ENST00000591956 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 STXBP3O00186 592 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
SNHG16-208ENST00000591956 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
SNHG16-208ENST00000591956 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
SNHG16-208ENST00000591956 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 PGM5Q15124 567 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 LRRC41Q15345 812 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 WWC2Q6AWC2 1192 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
SNHG16-208ENST00000591956 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
SNHG16-208ENST00000591956 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
SNHG16-208ENST00000591956 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 FRMPD3Q5JV73 1810 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 KPNA6O60684 536 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 DEXIO95424 95 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 SMPD1P17405 629 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
SNHG16-208ENST00000591956 ICAM3P32942 547 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 NAPAP54920 295 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 SCRN1Q12765 414 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 RABEP1Q15276 862 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 USP17L6PQ6QN14 398 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 HEATR3Q7Z4Q2 680 aa13.07□□□□□ -0.32
SNHG16-208ENST00000591956 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms