RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 POLR2MP0CAP2 368 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 EVCP57679 992 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 GHRHRQ02643 423 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 TNFAIP2Q03169 654 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 PDE4DQ08499 809 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 STK3Q13188 491 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
VMP1-211ENST00000591315 HEATR3Q7Z4Q2 680 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 COPS5Q92905 334 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 PHKBQ93100 1093 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
VMP1-211ENST00000591315 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
VMP1-211ENST00000591315 MEIS2O14770 477 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 DUSP11O75319 330 aaKnown RBP13.3□□□□□ -0.28
VMP1-211ENST00000591315 ARIH2O95376 493 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
VMP1-211ENST00000591315 ANAPC15P60006 121 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 BEX3Q00994 111 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 NTRK3Q16288 839 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 UBE2SQ16763 222 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 DPF3Q92784 378 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 TPCN1Q9ULQ1 816 aa13.3□□□□□ -0.28
VMP1-211ENST00000591315 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
VMP1-211ENST00000591315 STXBP3O00186 592 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 DNM1LO00429 736 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
VMP1-211ENST00000591315 LARGE1O95461 756 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 NR3C2P08235 984 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
VMP1-211ENST00000591315 RCAN1P53805 252 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 AK2P54819 239 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 PKN1Q16512 942 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 ARRDC4Q8NCT1 418 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
VMP1-211ENST00000591315 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 KIF2CQ99661 725 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 PDCD2LQ9BRP1 358 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 WDR11Q9BZH6 1224 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 NID2Q14112 1375 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
VMP1-211ENST00000591315 RANBP2P49792 3224 aaKnown RBP13.28□□□□□ -0.28
VMP1-211ENST00000591315 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
VMP1-211ENST00000591315 H0YGN5 161 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 RGS20O76081 388 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 C6orf222P0C671 652 aaPredicted RBP13.28□□□□□ -0.28
VMP1-211ENST00000591315 GJA9P57773 515 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 KCNA10Q16322 511 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 IQSEC1Q6DN90 963 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
VMP1-211ENST00000591315 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 SLC26A6Q9BXS9 759 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 UPF3AQ9H1J1 476 aaKnown RBP13.28□□□□□ -0.28
VMP1-211ENST00000591315 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
VMP1-211ENST00000591315 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 KBTBD13C9JR72 458 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 SORBS3O60504 671 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 NEK4P51957 841 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 NAPAP54920 295 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 MRPS9P82933 396 aaKnown RBP13.27□□□□□ -0.29
VMP1-211ENST00000591315 TRAF1Q13077 416 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 PGM5Q15124 567 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 GNASQ5JWF2 1037 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 CCDC62Q6P9F0 684 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 RNF180Q86T96 592 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 TLK2Q86UE8 772 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 C7orf61Q8IZ16 206 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 NECAB1Q8N987 351 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 ZNF274Q96GC6 653 aaPredicted RBP13.27□□□□□ -0.29
VMP1-211ENST00000591315 AIFM3Q96NN9 605 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 BCAS3Q9H6U6 928 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 TMEM260Q9NX78 707 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 PHF24Q9UPV7 400 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.29
VMP1-211ENST00000591315 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 A0A1W2PQ45 241 aaPredicted RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 A0A1W2PQY0 241 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 PIK3CDO00329 1044 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 SCG2P13521 617 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 IFNAR1P17181 557 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 CAPN2P17655 700 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 ACLYP53396 1101 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 SCRN1Q12765 414 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 PWP2Q15269 919 aaKnown RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 STXBP2Q15833 593 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 LY6KQ17RY6 165 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 DUSP28Q4G0W2 176 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 VSIG10LQ86VR7 867 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms