RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 TLK2Q86UE8 772 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 WDR11Q9BZH6 1224 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 AP5M1Q9H0R1 490 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 PXMP2Q9NR77 195 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 ATP11BQ9Y2G3 1177 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 PLXNA1Q9UIW2 1896 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 LOC102724159A0A0B4J2E5 919 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 EDNRBP24530 442 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 PWP2Q15269 919 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 STXBP2Q15833 593 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 GNASQ5JWF2 1037 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 IQSEC1Q6DN90 963 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 CUL5Q93034 780 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 MAF1Q9H063 256 aa16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 FAM217BQ9NTX9 383 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 ZMYND8Q9ULU4 1186 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-212ENST00000590266 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 A0A1W2PQ45 241 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 A0A1W2PQY0 241 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 EIF5BO60841 1220 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 NR3C2P08235 984 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 SYN1P17600 705 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 ACLYP53396 1101 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 NAPAP54920 295 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 GJA9P57773 515 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 STK3Q13188 491 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 PPP2R5BQ15173 497 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 USP17L6PQ6QN14 398 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 IWS1Q96ST2 819 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 TM6SF1Q9BZW5 370 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 NCOA5Q9HCD5 579 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 PHF24Q9UPV7 400 aa16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-212ENST00000590266 ASGR1P07306 291 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 TXNP10599 105 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 RCAN1P53805 252 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 RTP1P59025 263 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 UBE2SQ16763 222 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 SLC39A5Q6ZMH5 540 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 KLHDC9Q8NEP7 349 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 SCFD2Q8WU76 684 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 COPS5Q92905 334 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 UPF3AQ9H1J1 476 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 PSTPIP2Q9H939 334 aa16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-212ENST00000590266 ZNFX1Q9P2E3 1918 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 CCND2P30279 289 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 GHRHRQ02643 423 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 FUT2Q10981 343 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 TTLL4Q14679 1199 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 PGM5Q15124 567 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 FSCN1Q16658 493 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 LY6KQ17RY6 165 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 TRIM60Q495X7 471 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 DUSP28Q4G0W2 176 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 SAMD3Q8N6K7 520 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 PCSK9Q8NBP7 692 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 PHKBQ93100 1093 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 TSEN34Q9BSV6 310 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 STARD7Q9NQZ5 370 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 CEP290O15078 2479 aa16.16■□□□□ 0.18
SCAMP4-212ENST00000590266 MOXD2PA6NHM9 499 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 SORBS3O60504 671 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 ARIH2O95376 493 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 ANAPC15P60006 121 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 CCSAPQ6IQ19 270 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 GLT1D1Q96MS3 346 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 PRDM5Q9NQX1 630 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
SCAMP4-212ENST00000590266 RBM47A0AV96 593 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 MEIS2O14770 477 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 CPLX1O14810 134 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 CTAGE5O15320 804 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 ZEB2O60315 1214 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 MYL3P08590 195 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 CXCL17Q6UXB2 119 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 RTEL1Q9NZ71 1219 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms