RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 STXBP5LQ9Y2K9 1186 aa14.78□□□□□ -0.04
RFX1-207ENST00000589937 GRXCR1A8MXD5 290 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 KLRF2D3W0D1 207 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 IFIT3O14879 490 aaKnown RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 CCL23P55773 120 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 TMEM240Q5SV17 173 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 HOMER1Q86YM7 354 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 DNERQ8NFT8 737 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 IL31RAQ8NI17 732 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 RUFY2Q8WXA3 655 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 MYL10Q9BUA6 226 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 NOC4LQ9BVI4 516 aaKnown RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 HIPK3Q9H422 1215 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 Q9Y3F1 56 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 RBM8AQ9Y5S9 174 aaKnown RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
RFX1-207ENST00000589937 REV3LO60673 3130 aa14.77□□□□□ -0.05
RFX1-207ENST00000589937 PALM3A6NDB9 673 aaPredicted RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 CYTH3O43739 400 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 CABYRO75952 493 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 CFBP00751 764 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 CYP2C9P11712 490 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 HOXA13P31271 388 aaPredicted RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 PBX2P40425 430 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 GRM4Q14833 912 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 LY6KQ17RY6 165 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 SEPT14Q6ZU15 432 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 MB21D2Q8IYB1 491 aaPredicted RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 SLC17A8Q8NDX2 589 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 MYLIPQ8WY64 445 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 VWCEQ96DN2 955 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 MTMR8Q96EF0 704 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 SCLYQ96I15 445 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 ZFP91Q96JP5 570 aaPredicted RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 ALDH8A1Q9H2A2 487 aaPredicted RBP14.76□□□□□ -0.05
RFX1-207ENST00000589937 VCANP13611 3396 aa14.76□□□□□ -0.05
RFX1-207ENST00000589937 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 ZEB2O60315 1214 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 SORBS3O60504 671 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 TXNP10599 105 aaKnown RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 NT5C2P49902 561 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 CHMP4BP1P59074 171 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 TRDNQ13061 729 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 PPIGQ13427 754 aaKnown RBP eCLIP14.75□□□□□ -0.05
RFX1-207ENST00000589937 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 CCDC62Q6P9F0 684 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 ZNF365Q70YC5 407 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 RALYLQ86SE5 291 aaKnown RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 RGS22Q8NE09 1264 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 PIGSQ96S52 555 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 RMDN3Q96TC7 470 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 CDX2Q99626 313 aaPredicted RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 LSG1Q9H089 658 aaKnown RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 SEMA6BQ9H3T3 888 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 PXMP2Q9NR77 195 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 CXXC1Q9P0U4 656 aaPredicted RBP14.75□□□□□ -0.05
RFX1-207ENST00000589937 PNMA2Q9UL42 364 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 CUL9Q8IWT3 2517 aa14.75□□□□□ -0.05
RFX1-207ENST00000589937 DNAJB2P25686 324 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 CPT1AP50416 773 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 HSD17B4P51659 736 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 ARHGAP1Q07960 439 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 WTAPQ15007 396 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 NBPF20Q3BBV1 942 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 FAM47CQ5HY64 1035 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 TMEM67Q5HYA8 995 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 RASIP1Q5U651 963 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 RAB11FIP4Q86YS3 637 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 TMEM199Q8N511 208 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 AFG1LQ8WV93 481 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 MAP4K1Q92918 833 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 MTG1Q9BT17 334 aaPredicted RBP14.74□□□□□ -0.05
RFX1-207ENST00000589937 AMNQ9BXJ7 453 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 POLR3EQ9NVU0 708 aa14.74□□□□□ -0.05
RFX1-207ENST00000589937 MRPL11Q9Y3B7 192 aaKnown RBP14.74□□□□□ -0.05
RFX1-207ENST00000589937 A6NJR5 290 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 ZBTB5O15062 677 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 TROAPQ12815 778 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 TTLL4Q14679 1199 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 ARHGEF16Q5VV41 709 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 NCOA7Q8NI08 942 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 NSUN6Q8TEA1 469 aaKnown RBP14.73□□□□□ -0.05
RFX1-207ENST00000589937 GPKOWQ92917 476 aaPredicted RBP eCLIP14.73□□□□□ -0.05
RFX1-207ENST00000589937 ESYT1Q9BSJ8 1104 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 LY9Q9HBG7 655 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 IL23AQ9NPF7 189 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 PCDHA1Q9Y5I3 950 aa14.73□□□□□ -0.05
RFX1-207ENST00000589937 COL4A4P53420 1690 aaPredicted RBP14.72□□□□□ -0.05
RFX1-207ENST00000589937 RGS20O76081 388 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 MMP3P08254 477 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 ZNF286BP0CG31 522 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 RXRAP19793 462 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 OTOP2Q7RTS6 562 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 MCF2L2Q86YR7 1114 aa14.72□□□□□ -0.05
RFX1-207ENST00000589937 IGDCC4Q8TDY8 1250 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms