RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SOWAHBA6NEL2 793 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 XRCC5P13010 732 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 PDIA4P13667 645 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 IRF5Q13568 498 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 NPY5RQ15761 445 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 MCTP1Q6DN14 999 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 CTU1Q7Z7A3 348 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 TRMT44Q8IYL2 757 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 RASGRP4Q8TDF6 673 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 MAML3Q96JK9 1138 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 PURBQ96QR8 312 aaKnown RBP15.58■□□□□ 0.08
VMP1-210ENST00000589823 PXMP2Q9NR77 195 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 TMEM260Q9NX78 707 aa15.58■□□□□ 0.08
VMP1-210ENST00000589823 LOC102724159A0A0B4J2E5 919 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 ASB14A6NK59 587 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 BTBD18B2RXH4 712 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 SYT1P21579 422 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 ALDH5A1P51649 535 aaPredicted RBP15.57■□□□□ 0.08
VMP1-210ENST00000589823 PWP2Q15269 919 aaKnown RBP15.57■□□□□ 0.08
VMP1-210ENST00000589823 KRT25Q7Z3Z0 450 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 IWS1Q96ST2 819 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 ANO3Q9BYT9 981 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 FOXP1Q9H334 677 aaPredicted RBP15.57■□□□□ 0.08
VMP1-210ENST00000589823 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
VMP1-210ENST00000589823 CCDC194A0A1B0GVG4 234 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 M0R2N6 131 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 ADAMTS3O15072 1205 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 STX6O43752 255 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 ADCY3O60266 1144 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 NONOQ15233 471 aaKnown RBP eCLIP15.56■□□□□ 0.08
VMP1-210ENST00000589823 OLFML2BQ68BL8 750 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
VMP1-210ENST00000589823 PGBD1Q96JS3 809 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 FGD4Q96M96 766 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 PDCD2LQ9BRP1 358 aa15.56■□□□□ 0.08
VMP1-210ENST00000589823 CASP8AP2Q9UKL3 1982 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 ZNFX1Q9P2E3 1918 aaKnown RBP15.55■□□□□ 0.08
VMP1-210ENST00000589823 ASTN1O14525 1302 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 FRMPD4Q14CM0 1322 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 RPTORQ8N122 1335 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 CCND2P30279 289 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 UBXN2AP68543 259 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 PDE4DQ08499 809 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 NR5A1Q13285 461 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 PGM5Q15124 567 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 CCL14Q16627 93 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 MFSD14CQ5VZR4 134 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 SLAIN1Q8ND83 568 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 TINF2Q9BSI4 451 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 PTPN22Q9Y2R2 807 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 PTCH2Q9Y6C5 1203 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 DOCK3Q8IZD9 2030 aa15.55■□□□□ 0.08
VMP1-210ENST00000589823 SYNGAP1Q96PV0 1343 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 NR3C2P08235 984 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 MYCLP12524 364 aaPredicted RBP15.54■□□□□ 0.08
VMP1-210ENST00000589823 SREBF1P36956 1147 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 STXBP2Q15833 593 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 PKN2Q16513 984 aaKnown RBP15.54■□□□□ 0.08
VMP1-210ENST00000589823 XRRA1Q6P2D8 792 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 MAMDC4Q6UXC1 1216 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 ARMCX2Q7L311 632 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 NOSTRINQ8IVI9 506 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 PXYLP1Q8TE99 480 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 TNFRSF25Q93038 417 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
VMP1-210ENST00000589823 FLRT1Q9NZU1 646 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
VMP1-210ENST00000589823 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 EDNRBP24530 442 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.08
VMP1-210ENST00000589823 GRK4P32298 578 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 ARHGAP4P98171 946 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 PCNX4Q63HM2 1172 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 MORC4Q8TE76 937 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 TRIB2Q92519 343 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.53■□□□□ 0.08
VMP1-210ENST00000589823 CNPY2Q9Y2B0 182 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 LCTP09848 1927 aa15.53■□□□□ 0.08
VMP1-210ENST00000589823 KIF28PB7ZC32 967 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 STAM2O75886 525 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 HMGCRP04035 888 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 ELNP15502 786 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 CYP2C19P33261 490 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 ZNF76P36508 570 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 INF2Q27J81 1249 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 VSIG10LQ86VR7 867 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 IL31RAQ8NI17 732 aa15.52■□□□□ 0.08
VMP1-210ENST00000589823 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
VMP1-210ENST00000589823 EIF3JO75822 258 aaKnown RBP15.51■□□□□ 0.07
VMP1-210ENST00000589823 CYP3A4P08684 503 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 USP11P51784 963 aa15.51■□□□□ 0.07
VMP1-210ENST00000589823 EARS2Q5JPH6 523 aaKnown RBP15.51■□□□□ 0.07
VMP1-210ENST00000589823 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
VMP1-210ENST00000589823 EEPD1Q7L9B9 569 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms