RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ADD3Q9UEY8 706 aaKnown RBP17.35■□□□□ 0.37
ATG4D-211ENST00000589753 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 SOWAHBA6NEL2 793 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 FOXN1O15353 648 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
ATG4D-211ENST00000589753 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
ATG4D-211ENST00000589753 HOXD10P28358 340 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 RGS2P41220 211 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
ATG4D-211ENST00000589753 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 ARHGEF16Q5VV41 709 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 USP6NLQ92738 828 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
ATG4D-211ENST00000589753 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
ATG4D-211ENST00000589753 DIS3Q9Y2L1 958 aaKnown RBP17.34■□□□□ 0.37
ATG4D-211ENST00000589753 LCTP09848 1927 aa17.33■□□□□ 0.37
ATG4D-211ENST00000589753 ZNFX1Q9P2E3 1918 aaKnown RBP17.33■□□□□ 0.37
ATG4D-211ENST00000589753 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 BRD1O95696 1058 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 HOXC6P09630 235 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 HSPA8P11142 646 aaKnown RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 EIF2AK2P19525 551 aaKnown RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 ALDH5A1P51649 535 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 NUCB2P80303 420 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 EARS2Q5JPH6 523 aaKnown RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 FOXD4L5Q5VV16 416 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 TBCKQ8TEA7 893 aa17.33■□□□□ 0.36
ATG4D-211ENST00000589753 FOXD4L4Q8WXT5 416 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-211ENST00000589753 ASTN1O14525 1302 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 FAM205CA6NFA0 338 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 B4DLN1 442 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 F13A1P00488 732 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 CYP2B6P20813 491 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 SREBF1P36956 1147 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-211ENST00000589753 FLT3LGP49771 235 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 UBXN2AP68543 259 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 PRKCZQ05513 592 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 RESTQ13127 1097 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 PGM5Q15124 567 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 INF2Q27J81 1249 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-211ENST00000589753 NPLOC4Q8TAT6 608 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 FGD4Q96M96 766 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 APBA2Q99767 749 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 ZDHHC9Q9Y397 364 aa17.32■□□□□ 0.36
ATG4D-211ENST00000589753 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
ATG4D-211ENST00000589753 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
ATG4D-211ENST00000589753 ASB14A6NK59 587 aa17.31■□□□□ 0.36
ATG4D-211ENST00000589753 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
ATG4D-211ENST00000589753 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
ATG4D-211ENST00000589753 MAML3Q96JK9 1138 aa17.31■□□□□ 0.36
ATG4D-211ENST00000589753 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
ATG4D-211ENST00000589753 NR3C2P08235 984 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 MYCLP12524 364 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-211ENST00000589753 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
ATG4D-211ENST00000589753 CCND2P30279 289 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 USP11P51784 963 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 PCNX4Q63HM2 1172 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 IL31RAQ8NI17 732 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 CRYGNQ8WXF5 182 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 CHMP5Q9NZZ3 219 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 TRIM17Q9Y577 477 aa17.3■□□□□ 0.36
ATG4D-211ENST00000589753 CYP3A4P08684 503 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 EDNRBP24530 442 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 LBX1P52954 281 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 PRMT2P55345 433 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 PDE4DQ08499 809 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 IRF5Q13568 498 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 XRRA1Q6P2D8 792 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 MAMDC4Q6UXC1 1216 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 OTOP1Q7RTM1 612 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
ATG4D-211ENST00000589753 MORC4Q8TE76 937 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 DOCK3Q8IZD9 2030 aa17.29■□□□□ 0.36
ATG4D-211ENST00000589753 ZNF76P36508 570 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 STXBP2Q15833 593 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 CCL14Q16627 93 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 LETM2Q2VYF4 491 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 TRMT44Q8IYL2 757 aaKnown RBP17.28■□□□□ 0.36
ATG4D-211ENST00000589753 NAP1L4Q99733 375 aaKnown RBP17.28■□□□□ 0.36
ATG4D-211ENST00000589753 TINF2Q9BSI4 451 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
ATG4D-211ENST00000589753 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms