RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
VAT1-206ENST00000589709 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
VAT1-206ENST00000589709 PALM3A6NDB9 673 aaPredicted RBP14.24□□□□□ -0.13
VAT1-206ENST00000589709 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 DLL1O00548 723 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 DHX16O60231 1041 aaKnown RBP14.24□□□□□ -0.13
VAT1-206ENST00000589709 CYP21A2P08686 494 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
VAT1-206ENST00000589709 CCDC62Q6P9F0 684 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 STAG2Q8N3U4 1231 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 HERVK_113Q902F9 699 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 AMNQ9BXJ7 453 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 MAP3K20Q9NYL2 800 aaKnown RBP14.24□□□□□ -0.13
VAT1-206ENST00000589709 COL20A1Q9P218 1284 aa14.24□□□□□ -0.13
VAT1-206ENST00000589709 SGSM2O43147 1006 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 FGBP02675 491 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 MYL3P08590 195 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 ACRP10323 421 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 DNAJB2P25686 324 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 PTH1RQ03431 593 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
VAT1-206ENST00000589709 TRAF1Q13077 416 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 STXBP2Q15833 593 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 NFRKBQ6P4R8 1299 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 RPUSD2Q8IZ73 545 aaKnown RBP14.23□□□□□ -0.13
VAT1-206ENST00000589709 SAMD3Q8N6K7 520 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
VAT1-206ENST00000589709 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
VAT1-206ENST00000589709 UMODL1Q5DID0 1318 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 ZBTB5O15062 677 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
VAT1-206ENST00000589709 ARIH2O95376 493 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 HSD17B4P51659 736 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 NBPF20Q3BBV1 942 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 COPS5Q92905 334 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 WNT8AQ9H1J5 351 aa14.22□□□□□ -0.13
VAT1-206ENST00000589709 E7EWF7 191 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 OPLAHO14841 1288 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.13
VAT1-206ENST00000589709 GH1P01241 217 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 CCL23P55773 120 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 GRM4Q14833 912 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 ARHGEF16Q5VV41 709 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 SEPT14Q6ZU15 432 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 STOX1Q6ZVD7 989 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
VAT1-206ENST00000589709 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 MYLIPQ8WY64 445 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 PBX4Q9BYU1 374 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 ZNF576Q9H609 170 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 RIOX1Q9H6W3 641 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 TRMT13Q9NUP7 481 aaKnown RBP14.21□□□□□ -0.13
VAT1-206ENST00000589709 PCDHA1Q9Y5I3 950 aa14.21□□□□□ -0.13
VAT1-206ENST00000589709 CUL9Q8IWT3 2517 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 ERICH2A1L162 156 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 PPP1R11O60927 126 aaPredicted RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 CFBP00751 764 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 NR3C2P08235 984 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 PFKMP08237 780 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 CYP2C9P11712 490 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 ARHGAP1Q07960 439 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 TROAPQ12815 778 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 GRIN2CQ14957 1233 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.2□□□□□ -0.14
VAT1-206ENST00000589709 MAFAQ8NHW3 353 aaPredicted RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 AFG1LQ8WV93 481 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 EMID1Q96A84 441 aaPredicted RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 PXMP2Q9NR77 195 aa14.2□□□□□ -0.14
VAT1-206ENST00000589709 CXXC1Q9P0U4 656 aaPredicted RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 DDX41Q9UJV9 622 aaKnown RBP14.2□□□□□ -0.14
VAT1-206ENST00000589709 GRXCR1A8MXD5 290 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 FOSL2P15408 326 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 EIF2AK2P19525 551 aaKnown RBP14.19□□□□□ -0.14
VAT1-206ENST00000589709 RFC2P35250 354 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 WTAPQ15007 396 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 RAB30Q15771 203 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 SLC35G1Q2M3R5 365 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 FAM47CQ5HY64 1035 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 SESTD1Q86VW0 696 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 MTA3Q9BTC8 594 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
VAT1-206ENST00000589709 PNMA6FA0A0J9YX94 578 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 CYTH3O43739 400 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 MMP3P08254 477 aa14.18□□□□□ -0.14
VAT1-206ENST00000589709 CASTP20810 708 aaKnown RBP14.18□□□□□ -0.14
VAT1-206ENST00000589709 PBX2P40425 430 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms