RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
H3F3B-208ENST00000589599 STXBP2Q15833 593 aa19.53■□□□□ 0.72
H3F3B-208ENST00000589599 DUSP28Q4G0W2 176 aa19.53■□□□□ 0.72
H3F3B-208ENST00000589599 TLK2Q86UE8 772 aa19.53■□□□□ 0.72
H3F3B-208ENST00000589599 PXMP2Q9NR77 195 aa19.53■□□□□ 0.72
H3F3B-208ENST00000589599 CCDC196A0A1B0GTZ2 297 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 A0A1W2PQ45 241 aaPredicted RBP19.52■□□□□ 0.72
H3F3B-208ENST00000589599 A0A1W2PQY0 241 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 GOLGA8AA7E2F4 631 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 GOLGA8BA8MQT2 603 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
H3F3B-208ENST00000589599 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
H3F3B-208ENST00000589599 RTP1P59025 263 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 NKX3-2P78367 333 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 CCSAPQ6IQ19 270 aaPredicted RBP19.52■□□□□ 0.72
H3F3B-208ENST00000589599 FBXL16Q8N461 479 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 BRF1Q92994 677 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 CUL5Q93034 780 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 VTI1AQ96AJ9 217 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 GLT1D1Q96MS3 346 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 ATP11BQ9Y2G3 1177 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.72
H3F3B-208ENST00000589599 MYADML2A6NDP7 307 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 NKRFO15226 690 aaKnown RBP eCLIP19.51■□□□□ 0.713e-7■■□□□ 11.7
H3F3B-208ENST00000589599 NR3C2P08235 984 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 APOBRQ0VD83 1088 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 TTLL4Q14679 1199 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
H3F3B-208ENST00000589599 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 RUFY3Q7L099 469 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 FCHSD1Q86WN1 690 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 STARD7Q9NQZ5 370 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 PRKAG2Q9UGJ0 569 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 ZMYND8Q9ULU4 1186 aaPredicted RBP19.51■□□□□ 0.71
H3F3B-208ENST00000589599 FRMPD3Q5JV73 1810 aa19.51■□□□□ 0.71
H3F3B-208ENST00000589599 ASGR1P07306 291 aa19.5■□□□□ 0.71
H3F3B-208ENST00000589599 TXNP10599 105 aaKnown RBP19.5■□□□□ 0.71
H3F3B-208ENST00000589599 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.71
H3F3B-208ENST00000589599 BRDTQ58F21 947 aaPredicted RBP19.5■□□□□ 0.71
H3F3B-208ENST00000589599 CEP290O15078 2479 aa19.5■□□□□ 0.71
H3F3B-208ENST00000589599 ELP1O95163 1332 aa19.5■□□□□ 0.71
H3F3B-208ENST00000589599 hCG_1642624A0A1W2PR95 340 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 CTAGE5O15320 804 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 CABYRO75952 493 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-208ENST00000589599 SYN1P17600 705 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 BEX3Q00994 111 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 SNX17Q15036 470 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 TRIM60Q495X7 471 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 SEPT14Q6ZU15 432 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 OR6J1Q8NGC5 347 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 SMARCC2Q8TAQ2 1214 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 PDCD2LQ9BRP1 358 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-208ENST00000589599 MCM3APO60318 1980 aa19.49■□□□□ 0.71
H3F3B-208ENST00000589599 DNAH12Q6ZR08 3092 aa19.48■□□□□ 0.71
H3F3B-208ENST00000589599 CCND2P30279 289 aa19.48■□□□□ 0.71
H3F3B-208ENST00000589599 CPT1AP50416 773 aa19.48■□□□□ 0.71
H3F3B-208ENST00000589599 IRX5P78411 483 aaPredicted RBP19.48■□□□□ 0.71
H3F3B-208ENST00000589599 TMEM63BQ5T3F8 832 aa19.48■□□□□ 0.71
H3F3B-208ENST00000589599 AGXT2Q9BYV1 514 aa19.48■□□□□ 0.71
H3F3B-208ENST00000589599 COLQQ9Y215 455 aaPredicted RBP19.48■□□□□ 0.71
H3F3B-208ENST00000589599 BAZ2BQ9UIF8 2168 aaKnown RBP19.47■□□□□ 0.71
H3F3B-208ENST00000589599 PIK3CDO00329 1044 aa19.47■□□□□ 0.71
H3F3B-208ENST00000589599 TLE2Q04725 743 aa19.47■□□□□ 0.71
H3F3B-208ENST00000589599 VSIG10LQ86VR7 867 aa19.47■□□□□ 0.71
H3F3B-208ENST00000589599 MYH6P13533 1939 aa19.47■□□□□ 0.71
H3F3B-208ENST00000589599 DCDC2CA8MYV0 355 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 KPNA6O60684 536 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 PTGS1P23219 599 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 CDC27P30260 824 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
H3F3B-208ENST00000589599 FUT2Q10981 343 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 PGM5Q15124 567 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 CCDC62Q6P9F0 684 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 KCNV1Q6PIU1 500 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 CXCL17Q6UXB2 119 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 LBHD1Q9BQE6 289 aaPredicted RBP19.46■□□□□ 0.71
H3F3B-208ENST00000589599 FAM217BQ9NTX9 383 aaPredicted RBP19.46■□□□□ 0.71
H3F3B-208ENST00000589599 PDRG1Q9NUG6 133 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 POLR3EQ9NVU0 708 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 LCTP09848 1927 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 CNTNAP5Q8WYK1 1306 aa19.46■□□□□ 0.71
H3F3B-208ENST00000589599 A0A0U1RQG5 324 aaPredicted RBP19.45■□□□□ 0.7
H3F3B-208ENST00000589599 PQBP1O60828 265 aaKnown RBP19.45■□□□□ 0.7
H3F3B-208ENST00000589599 GH1P01241 217 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 EVCP57679 992 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 ANAPC15P60006 121 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 USP17L6PQ6QN14 398 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 GPKOWQ92917 476 aaPredicted RBP eCLIP19.45■□□□□ 0.75e-14■□□□□ 8.4
H3F3B-208ENST00000589599 TOX2Q96NM4 488 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 SEZ6LQ9BYH1 1024 aa19.45■□□□□ 0.7
H3F3B-208ENST00000589599 UPF3BQ9BZI7 483 aaKnown RBP19.45■□□□□ 0.7
H3F3B-208ENST00000589599 PRDM5Q9NQX1 630 aaPredicted RBP19.45■□□□□ 0.7
H3F3B-208ENST00000589599 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms