RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
VMP1-209ENST00000588915 BFSP2Q13515 415 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 AAMPQ13685 434 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 RETREG2Q8NC44 543 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 MUC3AQ02505 3323 aa16.41■□□□□ 0.22
VMP1-209ENST00000588915 IQCF3P0C7M6 154 aa16.4■□□□□ 0.22
VMP1-209ENST00000588915 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
VMP1-209ENST00000588915 RABGGTBP53611 331 aa16.4■□□□□ 0.22
VMP1-209ENST00000588915 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
VMP1-209ENST00000588915 ZNF589Q86UQ0 364 aaPredicted RBP16.4■□□□□ 0.22
VMP1-209ENST00000588915 ANKS1AQ92625 1134 aa16.4■□□□□ 0.22
VMP1-209ENST00000588915 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 ZNF213O14771 459 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 HAND2P61296 217 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
VMP1-209ENST00000588915 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 SESTD1Q86VW0 696 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 IQCA1Q86XH1 822 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 IWS1Q96ST2 819 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 GBF1Q92538 1859 aa16.39■□□□□ 0.21
VMP1-209ENST00000588915 NCOR1O75376 2440 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
VMP1-209ENST00000588915 AAK1Q2M2I8 961 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 CCDC155Q8N6L0 562 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 CAGE1Q8TC20 777 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 NSUN6Q8TEA1 469 aaKnown RBP16.38■□□□□ 0.21
VMP1-209ENST00000588915 CHD7Q9P2D1 2997 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 ABCB11O95342 1321 aa16.38■□□□□ 0.21
VMP1-209ENST00000588915 GTPBP6O43824 516 aaPredicted RBP16.37■□□□□ 0.21
VMP1-209ENST00000588915 MYOGP15173 224 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 SDSP20132 328 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 STXBP2Q15833 593 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 ADAMTS19Q8TE59 1207 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 AFAP1L1Q8TED9 768 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 COPS5Q92905 334 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
VMP1-209ENST00000588915 ARIH2O95376 493 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 GH1P01241 217 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 CA3P07451 260 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
VMP1-209ENST00000588915 PTGISQ16647 500 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 USH1GQ495M9 461 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 ASPRV1Q53RT3 343 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 SMC5Q8IY18 1101 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
VMP1-209ENST00000588915 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 UHRF1Q96T88 793 aaPredicted RBP16.36■□□□□ 0.21
VMP1-209ENST00000588915 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
VMP1-209ENST00000588915 MRPL11Q9Y3B7 192 aaKnown RBP16.36■□□□□ 0.21
VMP1-209ENST00000588915 HIP1O00291 1037 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 GOLGA8HP0CJ92 632 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 RBL2Q08999 1139 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
VMP1-209ENST00000588915 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 ADGRF4Q8IZF3 695 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
VMP1-209ENST00000588915 TAAR1Q96RJ0 339 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
VMP1-209ENST00000588915 LNPKQ9C0E8 428 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
VMP1-209ENST00000588915 COG5Q9UP83 839 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 MTCH2Q9Y6C9 303 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 NEDD4P46934 1319 aa16.35■□□□□ 0.21
VMP1-209ENST00000588915 KDM4AO75164 1064 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
VMP1-209ENST00000588915 MMP3P08254 477 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 BMP1P13497 986 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 TAP1Q03518 808 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 DGKDQ16760 1214 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 SEPT14Q6ZU15 432 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 SAMD3Q8N6K7 520 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
VMP1-209ENST00000588915 RMDN3Q96TC7 470 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
VMP1-209ENST00000588915 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
VMP1-209ENST00000588915 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
VMP1-209ENST00000588915 SCN5AQ14524 2016 aa16.33■□□□□ 0.21
VMP1-209ENST00000588915 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
VMP1-209ENST00000588915 SELPP16109 830 aa16.33■□□□□ 0.2
VMP1-209ENST00000588915 KCNJ6P48051 423 aa16.33■□□□□ 0.2
VMP1-209ENST00000588915 LAMC2Q13753 1193 aa16.33■□□□□ 0.2
VMP1-209ENST00000588915 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms