RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 EXOC6Q8TAG9 804 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 ANKS1AQ92625 1134 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 GAS2L1Q99501 681 aaPredicted RBP18.63■□□□□ 0.57
ERCC1-206ENST00000588300 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
ERCC1-206ENST00000588300 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 TNKSO95271 1327 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 ABCB11O95342 1321 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 KPNA6O60684 536 aa18.62■□□□□ 0.57
ERCC1-206ENST00000588300 TXNP10599 105 aaKnown RBP18.62■□□□□ 0.57
ERCC1-206ENST00000588300 TTLL4Q14679 1199 aa18.62■□□□□ 0.57
ERCC1-206ENST00000588300 KRT23Q9C075 422 aa18.62■□□□□ 0.57
ERCC1-206ENST00000588300 A6NJR5 290 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 CYP2C9P11712 490 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 NBPF20Q3BBV1 942 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 FAM47CQ5HY64 1035 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 ADGRF4Q8IZF3 695 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 ENAHQ8N8S7 591 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-206ENST00000588300 COPS5Q92905 334 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 SCLYQ96I15 445 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 CNNM2Q9H8M5 875 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 ZSWIM5Q9P217 1185 aa18.61■□□□□ 0.57
ERCC1-206ENST00000588300 DHX16O60231 1041 aaKnown RBP18.6■□□□□ 0.57
ERCC1-206ENST00000588300 PFKMP08237 780 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
ERCC1-206ENST00000588300 NFRKBQ6P4R8 1299 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 MCF2L2Q86YR7 1114 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 SLC4A7Q9Y6M7 1214 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 KIAA1217Q5T5P2 1943 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 TANC1Q9C0D5 1861 aa18.6■□□□□ 0.57
ERCC1-206ENST00000588300 ZBBXA8MT70 800 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 ARIH2O95376 493 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 PTPN11Q06124 597 aaPredicted RBP18.59■□□□□ 0.57
ERCC1-206ENST00000588300 QRICH1Q2TAL8 776 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 USP38Q8NB14 1042 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 SYTL5Q8TDW5 730 aaPredicted RBP18.59■□□□□ 0.57
ERCC1-206ENST00000588300 NSUN6Q8TEA1 469 aaKnown RBP18.59■□□□□ 0.57
ERCC1-206ENST00000588300 TBC1D5Q92609 795 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 NKX2-4Q9H2Z4 354 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 SLC28A3Q9HAS3 691 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 MRPL11Q9Y3B7 192 aaKnown RBP18.59■□□□□ 0.57
ERCC1-206ENST00000588300 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
ERCC1-206ENST00000588300 PRUNE2Q8WUY3 3088 aa18.58■□□□□ 0.57
ERCC1-206ENST00000588300 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
ERCC1-206ENST00000588300 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
ERCC1-206ENST00000588300 TAAR1Q96RJ0 339 aa18.58■□□□□ 0.56
ERCC1-206ENST00000588300 IWS1Q96ST2 819 aa18.58■□□□□ 0.56
ERCC1-206ENST00000588300 JMJD4Q9H9V9 463 aa18.58■□□□□ 0.56
ERCC1-206ENST00000588300 COL20A1Q9P218 1284 aa18.58■□□□□ 0.56
ERCC1-206ENST00000588300 YBX2Q9Y2T7 364 aaKnown RBP18.58■□□□□ 0.56
ERCC1-206ENST00000588300 GH1P01241 217 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 RFC2P35250 354 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 STXBP2Q15833 593 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 CCDC62Q6P9F0 684 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 DEFB128Q7Z7B8 93 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 VWCEQ96DN2 955 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 RMDN3Q96TC7 470 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 VAT1LQ9HCJ6 419 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
ERCC1-206ENST00000588300 PITPNM1O00562 1244 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 ACTN1P12814 892 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 ATP2A2P16615 1042 aaKnown RBP18.56■□□□□ 0.56
ERCC1-206ENST00000588300 ARHGEF16Q5VV41 709 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 PCDHA11Q9Y5I1 949 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 CHD9Q3L8U1 2897 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 MYO9BQ13459 2157 aa18.56■□□□□ 0.56
ERCC1-206ENST00000588300 CFBP00751 764 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 MMP3P08254 477 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 RABGGTBP53611 331 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 BFSP2Q13515 415 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 LY6KQ17RY6 165 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 PPP2R2DQ66LE6 453 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 AFG1LQ8WV93 481 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 PPM1EQ8WY54 764 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 AMNQ9BXJ7 453 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 IL25Q9H293 177 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 VCANP13611 3396 aa18.55■□□□□ 0.56
ERCC1-206ENST00000588300 IQCF3P0C7M6 154 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
ERCC1-206ENST00000588300 IGFBP4P22692 258 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 ARHGAP1Q07960 439 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 TRDNQ13061 729 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 TJAP1Q5JTD0 557 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 CHST3Q7LGC8 479 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 PXMP2Q9NR77 195 aa18.54■□□□□ 0.56
ERCC1-206ENST00000588300 KLRF2D3W0D1 207 aa18.53■□□□□ 0.56
ERCC1-206ENST00000588300 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
ERCC1-206ENST00000588300 NR3C2P08235 984 aa18.53■□□□□ 0.56
ERCC1-206ENST00000588300 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
ERCC1-206ENST00000588300 SEC23AQ15436 765 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms