RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 TCF20Q9UGU0 1960 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 CALML3P27482 149 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 RFC2P35250 354 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 RNF207Q6ZRF8 634 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 DHX38Q92620 1227 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 SLC9A7Q96T83 725 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
CLPTM1-208ENST00000588274 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 RBL2Q08999 1139 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 DNERQ8NFT8 737 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 KAT2BQ92831 832 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
CLPTM1-208ENST00000588274 NEDD4P46934 1319 aa16.24■□□□□ 0.19
CLPTM1-208ENST00000588274 SESTD1Q86VW0 696 aa16.24■□□□□ 0.19
CLPTM1-208ENST00000588274 LCHNA4D1U4 455 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 MMP3P08254 477 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 TXNP10599 105 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 PDE1AP54750 535 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 HAND2P61296 217 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 ARHGAP1Q07960 439 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 PDE4DQ08499 809 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 FAM47CQ5HY64 1035 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 TRAF7Q6Q0C0 670 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
CLPTM1-208ENST00000588274 RAD50Q92878 1312 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 KIAA1217Q5T5P2 1943 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 TLL1O43897 1013 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 KPNA6O60684 536 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 PLA2G5P39877 138 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 WDR5P61964 334 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 GRB10Q13322 594 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 TMCO2Q7Z6W1 182 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 TTC14Q96N46 770 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
CLPTM1-208ENST00000588274 CXCL10P02778 98 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 ACTN1P12814 892 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 DEFB103AP81534 67 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 SYTL5Q8TDW5 730 aaPredicted RBP16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 KHSRPQ92945 711 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 WNT8BQ93098 351 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
CLPTM1-208ENST00000588274 CCDC171Q6TFL3 1326 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 OPLAHO14841 1288 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 NBNO60934 754 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 BFSP2Q13515 415 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 USH1GQ495M9 461 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 AFAP1L1Q8TED9 768 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 C11orf16Q9NQ32 467 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
CLPTM1-208ENST00000588274 PCP11498 1178 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 HIC1Q14526 733 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 MBTPS1Q14703 1052 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 CDC37Q16543 378 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 PTGISQ16647 500 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 AAK1Q2M2I8 961 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 BRDTQ58F21 947 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 TAAR1Q96RJ0 339 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 MAF1Q9H063 256 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 SIP14410 1827 aa16.19■□□□□ 0.18
CLPTM1-208ENST00000588274 HAS3O00219 553 aa16.18■□□□□ 0.18
CLPTM1-208ENST00000588274 GTPBP6O43824 516 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-208ENST00000588274 RGS20O76081 388 aa16.18■□□□□ 0.18
CLPTM1-208ENST00000588274 F2P00734 622 aa16.18■□□□□ 0.18
CLPTM1-208ENST00000588274 HOXD8P13378 290 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms