RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	CCDC114	Q96M63	670 aa		10.51	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TAB2	Q9NYJ8	693 aa		10.51	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ZNF804B	A4D1E1	1349 aa		10.51	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	DDX60	Q8IY21	1712 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	BACH1	O14867	736 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ATP2B4	P23634	1241 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TUBB4B	P68371	445 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	HDLBP	Q00341	1268 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	DPYD	Q12882	1025 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	PUM3	Q15397	648 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	MICU3	Q86XE3	530 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TRIM42	Q8IWZ5	723 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ARL10	Q8N8L6	244 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	OR8K1	Q8NGG5	319 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TAOK3	Q9H2K8	898 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	EHD2	Q9NZN4	543 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SYNRG	Q9UMZ2	1314 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ANKRD31	Q8N7Z5	1873 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	WTIP	A6NIX2	430 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	N4BP3	O15049	544 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	FMNL1	O95466	1100 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CD151	P48509	253 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	KCTD19	Q17RG1	926 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	WASHC4	Q2M389	1173 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RRP12	Q5JTH9	1297 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CCDC122	Q5T0U0	273 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	NAA35	Q5VZE5	725 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CNGA4	Q8IV77	575 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CCDC82	Q8N4S0	544 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	KRI1	Q8N9T8	703 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RNPC3	Q96LT9	517 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	EYA3	Q99504	573 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LRRC1	Q9BTT6	524 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	DSCC1	Q9BVC3	393 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	YIPF2	Q9BWQ6	316 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SLC40A1	Q9NP59	571 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	PAG1	Q9NWQ8	432 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RGL1	Q9NZL6	768 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ZSCAN9	O15535	394 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	PPIP5K2	O43314	1243 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CCDC50	Q8IVM0	306 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RBM12B	Q8IXT5	1001 aa	Known RBP	10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LARGE2	Q8N3Y3	721 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SUPT20H	Q8NEM7	779 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TBC1D16	Q8TBP0	767 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	BICD1	Q96G01	975 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	JADE2	Q9NQC1	790 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LEMD3	Q9Y2U8	911 aa		10.5	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	MACROD2	A1Z1Q3	448 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	OPLAH	O14841	1288 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	YBX3	P16989	372 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SARS	P49591	514 aa	Known RBP	10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	5e-7	■■■■■ 27.9
CACNA2D4-223	ENST00000588077	CAVIN4	Q5BKX8	364 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	FAM228A	Q86W67	206 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TMTC1	Q8IUR5	882 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	PARP9	Q8IXQ6	854 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	MAB21L3	Q8N8X9	362 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	AEN	Q8WTP8	325 aa	Known RBP	10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	C7orf43	Q8WVR3	580 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	OSBP2	Q969R2	916 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	EPAS1	Q99814	870 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	KCNJ14	Q9UNX9	436 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RCCD1	A6NED2	376 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	BTBD18	B2RXH4	712 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	GRIN3B	O60391	1043 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	NDUFA10	O95299	355 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	PDIA5	Q14554	519 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CYP26C1	Q6V0L0	522 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	KIAA0825	Q8IV33	1275 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LPIN2	Q92539	896 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TRIM4	Q9C037	500 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LACRT	Q9GZZ8	138 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	POLL	Q9UGP5	575 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	DACH1	Q9UI36	760 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CTNND2	Q9UQB3	1225 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	MAPK8IP1	Q9UQF2	711 aa		10.49	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CDC25C	P30307	473 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SLC8A1	P32418	973 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LSP1	P33241	339 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	HERVK_113	P62684	666 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RASSF7	Q02833	373 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	UBE4A	Q14139	1066 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	DOK7	Q18PE1	504 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	LRRC23	Q53EV4	343 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CCDC178	Q5BJE1	867 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	ZMYM1	Q5SVZ6	1142 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	SPATA1	Q5VX52	437 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	MICALCL	Q6ZW33	695 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	RUFY1	Q96T51	708 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	FAM184B	Q9ULE4	1060 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	TAF1	P21675	1872 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077		A0A087X0B3	334 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	FAM237A	A0A1B0GTK4	181 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	FOXP2	O15409	715 aa		10.48	□□□□□ -0.73
CACNA2D4-223	ENST00000588077	CXCR5	P32302	372 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms