RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-206ENST00000587776 RETREG2Q8NC44 543 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 TTC14Q96N46 770 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-206ENST00000587776 KPNA6O60684 536 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 PCP11498 1178 aaKnown RBP17.77■□□□□ 0.44
HDAC5-206ENST00000587776 RFC2P35250 354 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
HDAC5-206ENST00000587776 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 GPATCH4Q5T3I0 446 aaKnown RBP17.77■□□□□ 0.44
HDAC5-206ENST00000587776 NFRKBQ6P4R8 1299 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 COPS5Q92905 334 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 CRBNQ96SW2 442 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.44
HDAC5-206ENST00000587776 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDAC5-206ENST00000587776 TTC28Q96AY4 2481 aa17.77■□□□□ 0.43
HDAC5-206ENST00000587776 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
HDAC5-206ENST00000587776 GOLGA8HP0CJ92 632 aa17.76■□□□□ 0.43
HDAC5-206ENST00000587776 TBC1D10CQ8IV04 446 aa17.76■□□□□ 0.43
HDAC5-206ENST00000587776 ESR2Q92731 530 aa17.76■□□□□ 0.43
HDAC5-206ENST00000587776 SLC9A7Q96T83 725 aa17.76■□□□□ 0.43
HDAC5-206ENST00000587776 UHRF1Q96T88 793 aaPredicted RBP17.76■□□□□ 0.43
HDAC5-206ENST00000587776 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 NEDD4P46934 1319 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-206ENST00000587776 A6NJR5 290 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 GTPBP6O43824 516 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-206ENST00000587776 CA3P07451 260 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 EDNRBP24530 442 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 BFSP2Q13515 415 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 CCDC155Q8N6L0 562 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 CHD9Q3L8U1 2897 aa17.75■□□□□ 0.43
HDAC5-206ENST00000587776 ZNF213O14771 459 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
HDAC5-206ENST00000587776 SNHG28P0DPA3 235 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 PTPN11Q06124 597 aaPredicted RBP17.74■□□□□ 0.43
HDAC5-206ENST00000587776 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
HDAC5-206ENST00000587776 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
HDAC5-206ENST00000587776 IQCA1Q86XH1 822 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 VWCEQ96DN2 955 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 UBA5Q9GZZ9 404 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 CERS4Q9HA82 394 aa17.74■□□□□ 0.43
HDAC5-206ENST00000587776 ABCB11O95342 1321 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 KIF28PB7ZC32 967 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 PTGISQ16647 500 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 CHST3Q7LGC8 479 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
HDAC5-206ENST00000587776 ARIH2O95376 493 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 GH1P01241 217 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 COL9A1P20849 921 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 KCNJ6P48051 423 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 AAK1Q2M2I8 961 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 RGS22Q8NE09 1264 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 AFG1LQ8WV93 481 aa17.72■□□□□ 0.43
HDAC5-206ENST00000587776 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
HDAC5-206ENST00000587776 RFXAPO00287 272 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 KDM4AO75164 1064 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 MMP3P08254 477 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 SDSP20132 328 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 LY6KQ17RY6 165 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 MCF2L2Q86YR7 1114 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 PHOSPHO2Q8TCD6 241 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
HDAC5-206ENST00000587776 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
HDAC5-206ENST00000587776 CHD7Q9P2D1 2997 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 BAIAP3O94812 1187 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 TFF2Q03403 129 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 STXBP2Q15833 593 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 ARHGEF16Q5VV41 709 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 CWC27Q6UX04 472 aaKnown RBP17.7■□□□□ 0.42
HDAC5-206ENST00000587776 HERC6Q8IVU3 1022 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 ADGRF4Q8IZF3 695 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 CAGE1Q8TC20 777 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 TAAR1Q96RJ0 339 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 RMDN3Q96TC7 470 aa17.7■□□□□ 0.42
HDAC5-206ENST00000587776 B4E1Z4 1266 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 TLL1O43897 1013 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 EIF2AK2P19525 551 aaKnown RBP17.69■□□□□ 0.42
HDAC5-206ENST00000587776 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
HDAC5-206ENST00000587776 NT5C2P49902 561 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 FBXO11Q86XK2 927 aa17.69■□□□□ 0.42
HDAC5-206ENST00000587776 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-206ENST00000587776 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms