RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 EPHX3Q9H6B9 360 aa18.38■□□□□ 0.53
NCLN-203ENST00000587740 VTA1Q9NP79 307 aa18.38■□□□□ 0.53
NCLN-203ENST00000587740 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
NCLN-203ENST00000587740 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
NCLN-203ENST00000587740 SCN10AQ9Y5Y9 1956 aa18.37■□□□□ 0.53
NCLN-203ENST00000587740 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
NCLN-203ENST00000587740 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
NCLN-203ENST00000587740 SKIV2LQ15477 1246 aaKnown RBP18.37■□□□□ 0.53
NCLN-203ENST00000587740 DUSP28Q4G0W2 176 aa18.37■□□□□ 0.53
NCLN-203ENST00000587740 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
NCLN-203ENST00000587740 PPP1R13LQ8WUF5 828 aa18.37■□□□□ 0.53
NCLN-203ENST00000587740 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
NCLN-203ENST00000587740 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
NCLN-203ENST00000587740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
NCLN-203ENST00000587740 TNKSO95271 1327 aa18.37■□□□□ 0.53
NCLN-203ENST00000587740 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 ORC4O43929 436 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
NCLN-203ENST00000587740 PFKMP08237 780 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 FGRP09769 529 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
NCLN-203ENST00000587740 PURAQ00577 322 aaKnown RBP18.36■□□□□ 0.53
NCLN-203ENST00000587740 AAK1Q2M2I8 961 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 NSMFQ6X4W1 530 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 IL17RBQ9NRM6 502 aa18.36■□□□□ 0.53
NCLN-203ENST00000587740 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
NCLN-203ENST00000587740 TLL1O43897 1013 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 NMT2O60551 498 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 TAP1Q03518 808 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 BAATQ14032 418 aaPredicted RBP18.35■□□□□ 0.53
NCLN-203ENST00000587740 SPRED2Q7Z698 418 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 LRFN3Q9BTN0 628 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
NCLN-203ENST00000587740 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
NCLN-203ENST00000587740 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.53
NCLN-203ENST00000587740 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
NCLN-203ENST00000587740 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
NCLN-203ENST00000587740 TRIP12Q14669 1992 aaPredicted RBP18.33■□□□□ 0.53
NCLN-203ENST00000587740 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.52
NCLN-203ENST00000587740 NFIBO00712 420 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
NCLN-203ENST00000587740 ICAM1P05362 532 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 MYL3P08590 195 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 CYP21A2P08686 494 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 NT5C2P49902 561 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 ARNTL2Q8WYA1 636 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 ESR2Q92731 530 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 SLC9A7Q96T83 725 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 PTPRSQ13332 1948 aa18.33■□□□□ 0.52
NCLN-203ENST00000587740 NEDD4P46934 1319 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 LPXNO60711 386 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 TRDNQ13061 729 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 PPP4R3BQ5MIZ7 849 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 PHOSPHO2Q8TCD6 241 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 MTG1Q9BT17 334 aaPredicted RBP18.32■□□□□ 0.52
NCLN-203ENST00000587740 KRT23Q9C075 422 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
NCLN-203ENST00000587740 COG5Q9UP83 839 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
NCLN-203ENST00000587740 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 REC8O95072 547 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 ACTN1P12814 892 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 RFC2P35250 354 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 SLC16A2P36021 539 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 NOVP48745 357 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 CPT1AP50416 773 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 GRB10Q13322 594 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 COPS5Q92905 334 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
NCLN-203ENST00000587740 B4E1Z4 1266 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 GPNMBQ14956 572 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 FAM47CQ5HY64 1035 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 RNF20Q5VTR2 975 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 SLC30A10Q6XR72 485 aa18.3■□□□□ 0.52
NCLN-203ENST00000587740 ADD3Q9UEY8 706 aaKnown RBP18.3■□□□□ 0.52
NCLN-203ENST00000587740 E7EWF7 191 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 SLC27A2O14975 620 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 KDM4AO75164 1064 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 NFRKBQ6P4R8 1299 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 HLA-CQ95604 372 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 FTOQ9C0B1 505 aaKnown RBP eCLIP18.29■□□□□ 0.52
NCLN-203ENST00000587740 GPHNQ9NQX3 736 aaPredicted RBP18.29■□□□□ 0.52
NCLN-203ENST00000587740 TCP11L1Q9NUJ3 509 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms