RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 SCFD2Q8WU76 684 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 INCENPQ9NQS7 918 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 PNMA2Q9UL42 364 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
CXXC1-208ENST00000587170 RFXAPO00287 272 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 MYL3P08590 195 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 SLC16A2P36021 539 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 ALX1Q15699 326 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
CXXC1-208ENST00000587170 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
CXXC1-208ENST00000587170 FAM122AQ96E09 287 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 CTAGE1Q96RT6 745 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 TCP11L1Q9NUJ3 509 aa16.67■□□□□ 0.26
CXXC1-208ENST00000587170 COL4A6Q14031 1691 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 TLL1O43897 1013 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CXXC1-208ENST00000587170 LPXNO60711 386 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 TOP1P11387 765 aaKnown RBP16.66■□□□□ 0.26
CXXC1-208ENST00000587170 RBL2Q08999 1139 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 SESTD1Q86VW0 696 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 TMEM47Q9BQJ4 181 aa16.66■□□□□ 0.26
CXXC1-208ENST00000587170 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
CXXC1-208ENST00000587170 DOCK5Q9H7D0 1870 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 PDHBP11177 359 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 MX1P20591 662 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
CXXC1-208ENST00000587170 RPS6P62753 249 aaKnown RBP16.65■□□□□ 0.26
CXXC1-208ENST00000587170 PDE4DQ08499 809 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 BFSP2Q13515 415 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 KRT40Q6A162 431 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
CXXC1-208ENST00000587170 MAF1Q9H063 256 aa16.65■□□□□ 0.26
CXXC1-208ENST00000587170 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 GRB10Q13322 594 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
CXXC1-208ENST00000587170 CCDC62Q6P9F0 684 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 CERS4Q9HA82 394 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 LMCD1Q9NZU5 365 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 MTMR7Q9Y216 660 aa16.64■□□□□ 0.25
CXXC1-208ENST00000587170 ARIH2O95376 493 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 CALML3P27482 149 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
CXXC1-208ENST00000587170 GPNMBQ14956 572 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 SPRED2Q7Z698 418 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 ARNTL2Q8WYA1 636 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 COPS5Q92905 334 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 HLA-CQ95604 372 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 KAT6AQ92794 2004 aa16.63■□□□□ 0.25
CXXC1-208ENST00000587170 FRMPD2Q68DX3 1309 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-208ENST00000587170 KIF28PB7ZC32 967 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 PARNO95453 639 aaKnown RBP16.62■□□□□ 0.25
CXXC1-208ENST00000587170 CXCL10P02778 98 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 TXNP10599 105 aaKnown RBP16.62■□□□□ 0.25
CXXC1-208ENST00000587170 PPP1R13LQ8WUF5 828 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 LRFN3Q9BTN0 628 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
CXXC1-208ENST00000587170 GPCPD1Q9NPB8 672 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 HELLSQ9NRZ9 838 aa16.62■□□□□ 0.25
CXXC1-208ENST00000587170 ZNF318Q5VUA4 2279 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 B4DLN1 442 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 MMP3P08254 477 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
CXXC1-208ENST00000587170 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
CXXC1-208ENST00000587170 ARHGAP1Q07960 439 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 PTGISQ16647 500 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 DHX38Q92620 1227 aaKnown RBP16.61■□□□□ 0.25
CXXC1-208ENST00000587170 KAT2BQ92831 832 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 TTC14Q96N46 770 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 C11orf16Q9NQ32 467 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
CXXC1-208ENST00000587170 FGAP02671 866 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 SELPP16109 830 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 KCNJ6P48051 423 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 GDF6Q6KF10 455 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-208ENST00000587170 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 HCN4Q9Y3Q4 1203 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
CXXC1-208ENST00000587170 GPR37L1O60883 481 aa16.59■□□□□ 0.25
CXXC1-208ENST00000587170 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
CXXC1-208ENST00000587170 AFG1LQ8WV93 481 aa16.59■□□□□ 0.25
CXXC1-208ENST00000587170 KHSRPQ92945 711 aaKnown RBP eCLIP16.59■□□□□ 0.25
CXXC1-208ENST00000587170 EMID1Q96A84 441 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms