RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 RIPOR3Q96MK2 946 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 YME1L1Q96TA2 773 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 MEIS3Q99687 375 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 IGFLR1Q9H665 355 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 SLC38A10Q9HBR0 1119 aa15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 A1CFQ9NQ94 594 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-211ENST00000586921 RAD50Q92878 1312 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 EYA4O95677 639 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 NDUFV1P49821 464 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 OAZ1P54368 228 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 WDR11Q9BZH6 1224 aa15.26■□□□□ 0.03
SMARCA4-211ENST00000586921 E9PSI1 815 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 LINC01565O15544 149 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 KPNA6O60684 536 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 ICAM3P32942 547 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 MTX1Q13505 466 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 PTPN21Q16825 1174 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 ST3GAL2Q16842 350 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 SMRP1Q8NCR6 262 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 SDR42E1Q8WUS8 393 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 MSLNLQ96KJ4 702 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 DCP1AQ9NPI6 582 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
SMARCA4-211ENST00000586921 CKBP12277 381 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 CDK8P49336 464 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 RBL2Q08999 1139 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 COL9A2Q14055 689 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 TMEM105Q8N8V8 129 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 DHX38Q92620 1227 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 RALGAPA2Q2PPJ7 1873 aa15.24■□□□□ 0.03
SMARCA4-211ENST00000586921 FRYLO94915 3013 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 USP24Q9UPU5 2620 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 CSPG5O95196 566 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 NDUFB10O96000 172 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 CTNNB1P35222 781 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 ADAM15Q13444 863 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 GDF6Q6KF10 455 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 ZBTB33Q86T24 672 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 KIAA2013Q8IYS2 634 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 C11orf84Q9BUA3 381 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 PHF7Q9BWX1 381 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-211ENST00000586921 F5H6K3 240 aa15.22■□□□□ 0.03
SMARCA4-211ENST00000586921 KLRC3Q07444 240 aa15.22■□□□□ 0.03
SMARCA4-211ENST00000586921 FEM1BQ9UK73 627 aa15.22■□□□□ 0.03
SMARCA4-211ENST00000586921 ANKRD11Q6UB99 2663 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-211ENST00000586921 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 GRM6O15303 877 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 LGR5O75473 907 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 COASYQ13057 564 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 KCNG4Q8TDN1 519 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 MORC4Q8TE76 937 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 ANTXR1Q9H6X2 564 aa15.21■□□□□ 0.03
SMARCA4-211ENST00000586921 FAM208BQ5VWN6 2430 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 A6NJR5 290 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 C5orf67F2Z3F1 127 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 PPP2R3CQ969Q6 453 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 COL26A1Q96A83 441 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 CLEC1BQ9P126 229 aa15.2■□□□□ 0.02
SMARCA4-211ENST00000586921 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 UPP2O95045 317 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 RB1P06400 928 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 GNAI3P08754 354 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 MBTPS1Q14703 1052 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 DLL3Q9NYJ7 618 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 CYP39A1Q9NYL5 469 aa15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 BAZ2AQ9UIF9 1905 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-211ENST00000586921 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 FDX1P10109 184 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 ALAS1P13196 640 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 TKFCQ3LXA3 575 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 DBF4BQ8NFT6 615 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 TOP1MTQ969P6 601 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
SMARCA4-211ENST00000586921 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms